RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CMBLQ96DG6 245 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 CPNE2Q96FN4 548 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 KCNK17Q96T54 332 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 PDCD10Q9BUL8 212 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 RBM24Q9BX46 236 aaKnown RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF471Q9BX82 626 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SRXN1Q9BYN0 137 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 FAM117AQ9C073 453 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 PTTG3PQ9NZH4 202 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 CDV3Q9UKY7 258 aaKnown RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SPTBN4Q9H254 2564 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 DOCK10Q96BY6 2186 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 KALRNO60229 2985 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 B4E171 279 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ACOT7O00154 380 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ONECUT2O95948 504 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ITGB2P05107 769 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 TSPAN7P41732 249 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 AP3S2P59780 193 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SPOCK1Q08629 439 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SSPNQ14714 243 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF528Q3MIS6 628 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SLC18B1Q6NT16 456 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM185AQ8NFB2 350 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 PAQR8Q8TEZ7 354 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SPOCK3Q9BQ16 436 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ASF1BQ9NVP2 202 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 STEAP1Q9UHE8 339 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ATPIF1Q9UII2 106 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 MYO7BQ6PIF6 2116 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 APC2O95996 2303 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ACACAQ13085 2346 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 TRAV14DV4A0A0A6YYC5 116 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 OR4C45A6NMZ5 311 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF726A6NNF4 738 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 A8MXK9 166 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 DNASE2O00115 360 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 P2RY10O00398 339 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 PRAF2O60831 178 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 WISP2O76076 250 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 GLSO94925 669 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ECDO95905 644 aaPredicted RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 AMY2AP04746 511 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 IL32P24001 234 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 DLX5P56178 289 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SLC17A1Q14916 467 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 MOGAT2Q3SYC2 334 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 TMPPEQ6ZT21 453 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 RNF144BQ7Z419 303 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF546Q86UE3 836 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF679Q8IYX0 411 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 OR6N1Q8NGY5 312 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 M1APQ8TC57 530 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 MCHR2Q969V1 340 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 LRFN5Q96NI6 719 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 C7orf50Q9BRJ6 194 aaKnown RBP6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ALKBH4Q9NXW9 302 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 SLC5A6Q9Y289 635 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 B3GALT5Q9Y2C3 310 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 PCSK5Q92824 1860 aa6.73□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF318Q5VUA4 2279 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 TMEM235A6NFC5 223 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ARGFXA6NJG6 315 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 F5H5K5 113 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 NKX2-8O15522 239 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 TRAF3IP2O43734 574 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 CXCL13O43927 109 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ATG12O94817 140 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 FGF2P09038 288 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 SPINK2P20155 84 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 LAP3P28838 519 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 DAP3P51398 398 aaKnown RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 P2RY4P51582 365 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 RBMS2Q15434 407 aaKnown RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 GUCA2BQ16661 112 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 Q499Y3 187 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 DCAF10Q5QP82 559 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 HACD4Q5VWC8 232 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 OR52W1Q6IF63 320 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 TFAP2EQ6VUC0 442 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 KCTD9Q7L273 389 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 SLC36A1Q7Z2H8 476 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 CDH26Q8IXH8 852 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ACBD4Q8NC06 268 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 NAXEQ8NCW5 288 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 STEAP2Q8NFT2 490 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ABHD3Q8WU67 409 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 PNPLA2Q96AD5 504 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 MIB2Q96AX9 1013 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ALKBH3Q96Q83 286 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 OR8B4Q96RC9 309 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 CCNL2Q96S94 520 aaPredicted RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF416Q9BWM5 594 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ANGPTL4Q9BY76 406 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 NOP16Q9Y3C1 178 aaKnown RBP6.72□□□□□ -1.33
TRIM55-202ENST00000315962 GGT3PA6NGU5 568 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 EEF1E1-BLOC1S5C9J1V9 151 aa6.72□□□□□ -1.33
TRIM55-202ENST00000315962 ZNF208O43345 1280 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms