RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 MMP16P51512 607 aa10.97□□□□□ -0.65
RNF4-201ENST00000314289 PCGF3Q3KNV8 242 aa10.97□□□□□ -0.65
RNF4-201ENST00000314289 CMBLQ96DG6 245 aa10.97□□□□□ -0.65
RNF4-201ENST00000314289 LRFN1Q9P244 771 aa10.97□□□□□ -0.65
RNF4-201ENST00000314289 A0A1B0GUH1 482 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 CREBL2O60519 120 aaPredicted RBP10.96□□□□□ -0.65
RNF4-201ENST00000314289 MT-CO3P00414 261 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 DBHP09172 617 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 ZNF883P0CG24 379 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 ITGA3P26006 1051 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 SLC6A9P48067 706 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 BAMBIQ13145 260 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 ZNF273Q14593 569 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 TGIF1Q15583 401 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 HES3Q5TGS1 186 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 CDCP2Q5VXM1 449 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 GLT8D1Q68CQ7 371 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 RGS7BPQ6MZT1 257 aaPredicted RBP10.96□□□□□ -0.65
RNF4-201ENST00000314289 ZNF283Q8N7M2 679 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 ACBD4Q8NC06 268 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 OR9K2Q8NGE7 335 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 OR52H1Q8NGJ2 320 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 NPRL2Q8WTW4 380 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 ZNF845Q96IR2 970 aaPredicted RBP10.96□□□□□ -0.65
RNF4-201ENST00000314289 SIGLEC12Q96PQ1 595 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 PIGQQ9BRB3 760 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 NPDC1Q9NQX5 325 aaPredicted RBP10.96□□□□□ -0.65
RNF4-201ENST00000314289 PCDHGA5Q9Y5G8 931 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 ETV7Q9Y603 341 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 MGAQ8IWI9 3026 aa10.96□□□□□ -0.65
RNF4-201ENST00000314289 LOC100289279A0A1B0GTE1 492 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 LRRC3CA6NJW4 275 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 MCRIP1C9JLW8 97 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 ZNF878C9JN71 531 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 CTDSPLO15194 276 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 SMAD9O15198 467 aaKnown RBP10.96□□□□□ -0.66
RNF4-201ENST00000314289 PRAF2O60831 178 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 RP2O75695 350 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 PMS2P2O95744 297 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 PLATP00750 562 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 APOC3P02656 99 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 CD63P08962 238 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 IGFBP3P17936 291 aaPredicted RBP10.96□□□□□ -0.66
RNF4-201ENST00000314289 ANKRD16Q6P6B7 361 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 BAIAP2L2Q6UXY1 529 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 ZNF704Q6ZNC4 412 aaPredicted RBP10.96□□□□□ -0.66
RNF4-201ENST00000314289 C17orf107Q6ZR85 190 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 DTX1Q86Y01 620 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 OR8B12Q8NGG6 310 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 ST8SIA2Q92186 375 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 SLC25A28Q96A46 364 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 SGCZQ96LD1 299 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 ALKBH3Q96Q83 286 aaPredicted RBP10.96□□□□□ -0.66
RNF4-201ENST00000314289 SHARPINQ9H0F6 387 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 CNTD2Q9H8S5 307 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 GPR84Q9NQS5 396 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 ZNF275Q9NSD4 429 aaPredicted RBP10.96□□□□□ -0.66
RNF4-201ENST00000314289 FBXO9Q9UK97 447 aaPredicted RBP10.96□□□□□ -0.66
RNF4-201ENST00000314289 GVINP1Q7Z2Y8 2422 aa10.96□□□□□ -0.66
RNF4-201ENST00000314289 A0A087WZY1 265 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 XRCC3O43542 346 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 TNFSF15O95150 251 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 ACHEP22303 614 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 CD96P40200 585 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 CX3CR1P49238 355 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 B3GALT5-AS1P59052 145 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 HLXQ14774 488 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 TMEM244Q5VVB8 128 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 GLDNQ6ZMI3 551 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 ZIC4Q8N9L1 334 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 PTPRZ1P23471 2315 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 HPP00738 406 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 UBCP0CG48 685 aaKnown RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 RAC1P63000 192 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 HIST3H3Q16695 136 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 TMEM164Q5U3C3 297 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 ADPRHL1Q8NDY3 354 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 LIN37Q96GY3 246 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 PNRC2Q9NPJ4 139 aaKnown RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 RABL2AQ9UBK7 228 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 SVILO95425 2214 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 FAM166BA8MTA8 275 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 ACOT7O00154 380 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 TLX3O43711 291 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 SPDEFO95238 335 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 RLN1P04808 185 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 SERPINA7P05543 415 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 GIPP09681 153 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 S100A11P31949 105 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 GUCA1AP43080 201 aaPredicted RBP10.95□□□□□ -0.66
RNF4-201ENST00000314289 ARHGDIBP52566 201 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 CARD18P57730 90 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 AP3S2P59780 193 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 ZNF528Q3MIS6 628 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 FAM166AQ6J272 317 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 ATRAIDQ6UW56 229 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 SEZ6L2Q6UXD5 910 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 MARC2Q969Z3 335 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 CMTM3Q96MX0 182 aa10.95□□□□□ -0.66
RNF4-201ENST00000314289 SPRY4Q9C004 299 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms