RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 POMT1Q9Y6A1 747 aa11.93□□□□□ -0.5
SNED1-201ENST00000310397 RAB27BO00194 218 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 TXNDC12O95881 172 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 NRASP01111 189 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 FABP1P07148 127 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 SFTA3P0C7M3 94 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 DVL1P1P54792 670 aaPredicted RBP11.92□□□□□ -0.5
SNED1-201ENST00000310397 PCBP3P57721 371 aaKnown RBP11.92□□□□□ -0.5
SNED1-201ENST00000310397 CORO6Q6QEF8 472 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 PBOV1Q9GZY1 135 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 ZNF732B4DXR9 585 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 SLC38A6Q8IZM9 456 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
SNED1-201ENST00000310397 ATF1P18846 271 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 OR2T2Q6IF00 324 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 SIGLEC11Q96RL6 698 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 SUCNR1Q9BXA5 334 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 FGF22Q9HCT0 170 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 CTDSPLO15194 276 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 CST4P01036 141 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 DHRS2Q13268 280 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 AGERQ15109 404 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 TBC1D28Q2M2D7 210 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 ZNF787Q6DD87 383 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 HGDQ93099 445 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 PELI1Q96FA3 418 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 SLCO1C1Q9NYB5 712 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 GP1BAP07359 652 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 CXCL12P48061 93 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 TMEM268Q5VZI3 342 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 C8orf82Q6P1X6 216 aaPredicted RBP11.92□□□□□ -0.5
SNED1-201ENST00000310397 KLHDC1Q8N7A1 406 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 SLCO1B1Q9Y6L6 691 aa11.92□□□□□ -0.5
SNED1-201ENST00000310397 G3V3Q6 166 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 OR5H8P0DN80 308 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 NCR3LG1Q68D85 454 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 OR2W3Q7Z3T1 314 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 NT5CQ8TCD5 201 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 FIGNL2A6NMB9 653 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 ALOX12BO75342 701 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 DUS4LO95620 317 aaKnown RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 RAE1P78406 368 aaKnown RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 B3GNTL1Q67FW5 361 aaPredicted RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 ZNF626Q68DY1 528 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 PLEKHB1Q9UF11 243 aaPredicted RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 TRAV20A0A0B4J274 112 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 ZNF573Q86YE8 665 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 MORN4Q8NDC4 146 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 ZNF775Q96BV0 537 aaPredicted RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 SIGLEC6O43699 453 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 COX5AP20674 150 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 CD300CQ08708 224 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 NKAIN1Q4KMZ8 207 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 SPANXN5Q5MJ07 72 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 LAIR1Q6GTX8 287 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 BPIFCQ8NFQ6 507 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 OR10P1Q8NGE3 313 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 WNT1P04628 370 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 PNLIPRP2P54317 469 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 NUDT9Q9BW91 350 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 NXPH3O95157 252 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 TBXA2RP21731 343 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 CSF2RBP32927 897 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 HSD17B13Q7Z5P4 300 aaPredicted RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 TMEM123Q8N131 208 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 RTN4IP1Q8WWV3 396 aaPredicted RBP11.91□□□□□ -0.5
SNED1-201ENST00000310397 PPIL1Q9Y3C6 166 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 KIAA2026Q5HYC2 2103 aa11.91□□□□□ -0.5
SNED1-201ENST00000310397 YKT6O15498 198 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 RSPO2Q6UXX9 243 aaPredicted RBP11.9□□□□□ -0.5
SNED1-201ENST00000310397 RTN4RL1Q86UN2 441 aaPredicted RBP11.9□□□□□ -0.5
SNED1-201ENST00000310397 CISD2Q8N5K1 135 aaKnown RBP11.9□□□□□ -0.5
SNED1-201ENST00000310397 SAT2Q96F10 170 aaPredicted RBP11.9□□□□□ -0.5
SNED1-201ENST00000310397 CHST6Q9GZX3 395 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 MBNL1Q9NR56 388 aaKnown RBP11.9□□□□□ -0.5
SNED1-201ENST00000310397 FPR2P25090 351 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.5
SNED1-201ENST00000310397 TAS2R45P59539 299 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 MOGAT2Q3SYC2 334 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 MIDNQ504T8 468 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 C9orf135Q5VTT2 229 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 ASB16Q96NS5 453 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 OXGR1Q96P68 337 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 SPTA1P02549 2419 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 OPRM1P35372 400 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 FZD2Q14332 565 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 CHRDL1Q9BU40 450 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 SLC35B3Q9H1N7 401 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 TMPRSS5Q9H3S3 457 aa11.9□□□□□ -0.5
SNED1-201ENST00000310397 TIMM10BQ9Y5J6 103 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms