RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 UBE2KP61086 200 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SSBP1Q04837 148 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 OR1C1Q15619 314 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF791Q3KP31 576 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DHRS13Q6UX07 377 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SYT9Q86SS6 491 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 C10orf111Q8N326 155 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 GALNT16Q8N428 558 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ARHGEF39Q8N4T4 335 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 MIB2Q96AX9 1013 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SMIM19Q96E16 107 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SCMH1Q96GD3 660 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 NMNAT3Q96T66 252 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 C1QTNF6Q9BXI9 259 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SLC17A5Q9NRA2 495 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 PURGQ9UJV8 347 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 B9D1Q9UPM9 204 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 TMEM82A0PJX8 343 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 LIPT2A6NK58 231 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 AQP7P3A6NL99 342 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SYT7O43581 403 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SCGB1D1O95968 90 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 CCNOP22674 350 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 C21orf33P30042 268 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 APLNRP35414 380 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DLX5P56178 289 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 CLDN17P56750 224 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 RRAS2P62070 204 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DCAF10Q5QP82 559 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 CDCP2Q5VXM1 449 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 C22orf42Q6IC83 251 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DOK3Q7L591 496 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DNAAF1Q8NEP3 725 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 FAM46BQ96A09 425 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 IMMP1LQ96LU5 166 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 Q96M85 177 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 NECAB3Q96P71 396 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SORCS2Q96PQ0 1159 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DPAGT1Q9H3H5 408 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ELOVL3Q9HB03 270 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SCP2D1Q9UJQ7 156 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 FOXJ3Q9UPW0 622 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 GAB2Q9UQC2 676 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 V9GY05 133 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ANKRD12Q6UB98 2062 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 A0A0X1KG70 313 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 A0A1W2PQ09 198 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 SMIM30A4D0T7 59 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 A8MXE2 369 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 PLPP2O43688 288 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 MT-CO2P00403 227 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 PMP2P02689 132 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 IFNA6P05013 189 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 CRYBA1P05813 215 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 SNRNP70P08621 437 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 ASAH2BP0C7U1 165 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 CCL4P13236 92 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 CD59P13987 128 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 SLC6A9P48067 706 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 PPIAP62937 165 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 INSM1Q01101 510 aaPredicted RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 NHLH1Q02575 133 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 HFEQ30201 348 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 RNASE12Q5GAN4 147 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 UBE2NLQ5JXB2 153 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 TMEM200AQ86VY9 491 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 STEAP2Q8NFT2 490 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OR4D11Q8NGI4 311 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OR10K1Q8NGX5 313 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 APH1AQ96BI3 265 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 C8orf44Q96CB5 159 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 ZFP3Q96NJ6 502 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 TIMM10BQ9Y5J6 103 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 MYO10Q9HD67 2058 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 LOC100509620A0A075B734 347 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 hCG_1809904A0A1W2PP81 198 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 A0A1W2PPE2 198 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 A0A1W2PR64 198 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 CYB5BO43169 146 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 XRCC2O43543 280 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 GGCTO75223 188 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OPN1MWP04001 364 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OPN1MW2P0DN77 364 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OPN1MW3P0DN78 364 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 GABRA1P14867 456 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 GABRB1P18505 474 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 EIF1AXP47813 144 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 GP2P55259 537 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 ACTBL2Q562R1 376 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 RBMS3Q6XE24 437 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 MRPL41Q8IXM3 137 aaKnown RBP5.37□□□□□ -1.55
SEC22A-201ENST00000309934 Q8N402 240 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 CYB561A3Q8NBI2 242 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OR10G3Q8NGC4 313 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 OR52N5Q8NH56 324 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 ABHD4Q8TB40 342 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 FCAMRQ8WWV6 532 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 ST6GAL2Q96JF0 529 aa5.37□□□□□ -1.55
SEC22A-201ENST00000309934 UCN2Q96RP3 112 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms