RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 PLEKHG7Q6ZR37 379 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SSX6Q7RTT6 188 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF786Q8N393 782 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ACBD7Q8N6N7 88 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR10AD1Q8NGE0 317 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR8B12Q8NGG6 310 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR56B2PQ8NGI1 322 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CNIH3Q8TBE1 160 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 APH1BQ8WW43 257 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 C18orf12Q96KH6 178 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SLC30A2Q9BRI3 323 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ADAT1Q9BUB4 502 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 REPIN1Q9BWE0 567 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PBOV1Q9GZY1 135 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CHODLQ9H9P2 273 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DLL4Q9NR61 685 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 FAM206AQ9NX38 181 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GNG8Q9UK08 70 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 R4GMQ9 66 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 hCG_38984A0A1B0GV85 526 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ANKRD30BLA7E2S9 258 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PRR32B1ATL7 298 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RNF223E7ERA6 249 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 H0YJX3 145 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CDC14BO60729 498 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SULT1C4O75897 302 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TACSTD2P09758 323 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GNALP38405 381 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GPR6P46095 362 aaPredicted RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 HSPA13P48723 471 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SRP9P49458 86 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MMP16P51512 607 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SLC3A1Q07837 685 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MZT1Q08AG7 82 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MED21Q13503 144 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RIPK1Q13546 671 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 Q6ZR03 302 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DNM1P46Q6ZS02 220 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PRSS45Q7RTY3 260 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CSNK2A3Q8NEV1 391 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ITLN1Q8WWA0 313 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SPSB4Q96A44 273 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 LGALS12Q96DT0 336 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR2V2Q96R30 315 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TMUB1Q9BVT8 246 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 REG4Q9BYZ8 158 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 AMBNQ9NP70 447 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 INPP5EQ9NRR6 644 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF275Q9NSD4 429 aaPredicted RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MRPL15Q9P015 296 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IL19Q9UHD0 177 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NUFIP1Q9UHK0 495 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MRM2Q9UI43 246 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 EXOGQ9Y2C4 368 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RRP15Q9Y3B9 282 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 YLPM1P49750 1951 aaKnown RBP9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TACC2O95359 2948 aa9.35□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 A0A0U1RQV5 110 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 C5orf63A6NC05 138 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CLDN25C9JDP6 229 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 LYNX1G3V0Z9 82 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MAGEB4O15481 346 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PPIHO43447 177 aaKnown RBP9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MTRF1O75570 445 aaKnown RBP9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 INHBBP09529 407 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 LYNX1P0DP58 116 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 FOSL1P15407 271 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ANOS1P23352 680 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CRYBB2P43320 205 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NR4A2P43354 598 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GSK3AP49840 483 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 FAM3AP98173 230 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF85Q03923 595 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MFGE8Q08431 387 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TP53I3Q53FA7 332 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 KCTD20Q7Z5Y7 419 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PEG10Q86TG7 708 aaKnown RBP9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR8S1Q8NH09 359 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NRG4Q8WWG1 115 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CCL17Q92583 94 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SGK3Q96BR1 496 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TIMD4Q96H15 378 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 COX4I2Q96KJ9 171 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ALG8Q9BVK2 526 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PAPOLGQ9BWT3 736 aaKnown RBP9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ABCB9Q9NP78 766 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR52A1Q9UKL2 312 aa9.34□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ANXA2P2A6NMY6 339 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 F5H5P2 479 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 H0YL77 283 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 IFNL4K9M1U5 179 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 MLNRO43193 412 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 RRP9O43818 475 aaKnown RBP9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 GMDSO60547 372 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 LILRA1O75019 489 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 FAM20BO75063 409 aa9.33□□□□□ -0.92
CSPG4P1Y-201ENST00000306641 WBP4O75554 376 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms