RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NTN1O95631 604 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 CST2P09228 141 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 AKAIN1P0CW23 69 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 FPR2P25090 351 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 SSTR2P30874 369 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 SOX18P35713 384 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 PSMA6P60900 246 aaKnown RBP8.21□□□□□ -1.1
PTPRE-202ENST00000306042 LSM6P62312 80 aaKnown RBP8.21□□□□□ -1.1
PTPRE-202ENST00000306042 BCL2A1Q16548 175 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 TIMP4Q99727 224 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 NOX3Q9HBY0 568 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 TINAGQ9UJW2 476 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 SPTAN1Q13813 2472 aaKnown RBP8.21□□□□□ -1.1
PTPRE-202ENST00000306042 LOC102723996A0A087X1L8 192 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 A0A1B0GVC2 190 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 KLF7O75840 302 aaPredicted RBP8.21□□□□□ -1.1
PTPRE-202ENST00000306042 GPANK1O95872 356 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 EPPINO95925 133 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF81P51508 661 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 UBE2NLQ5JXB2 153 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 DEGS2Q6QHC5 323 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 BTNL3Q6UXE8 466 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 LRRC28Q86X40 367 aaPredicted RBP8.21□□□□□ -1.1
PTPRE-202ENST00000306042 FLVCR1-AS1Q8TAF5 88 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 PRRT1Q99946 306 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 TXNL4BQ9NX01 149 aaKnown RBP8.21□□□□□ -1.1
PTPRE-202ENST00000306042 PRELID3BQ9Y3B1 194 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 SCN2AQ99250 2005 aa8.21□□□□□ -1.1
PTPRE-202ENST00000306042 CHRM2P08172 466 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CAV3P56539 151 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 TLE1Q04724 770 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 ZFP69Q49AA0 526 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 SFXN4Q6P4A7 337 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 PLXDC2Q6UX71 529 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF517Q6ZMY9 492 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-202ENST00000306042 GLRX5Q86SX6 157 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 OR10X1Q8NGY0 326 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 OR2AE1Q8NHA4 323 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 LGALS14Q8TCE9 139 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 ZFAND1Q8TCF1 268 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 OR2B2Q9GZK3 357 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 ZNF703Q9H7S9 590 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-202ENST00000306042 GPR27Q9NS67 375 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 GMEB1Q9Y692 573 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 PLXNA3P51805 1871 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 NYNRINQ9P2P1 1898 aaKnown RBP8.2□□□□□ -1.1
PTPRE-202ENST00000306042 TRDV1A0A1B0GX56 115 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CD1EP15812 388 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 BEX5Q5H9J7 111 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 PPA2Q9H2U2 334 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 TMEM38BQ9NVV0 291 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 KIR2DS1A0A191URI9 304 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 OR2AT4A6NND4 320 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 HPGDSO60760 199 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 GLAP06280 429 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CRHP06850 196 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 EPHA2P29317 976 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 THBS4P35443 961 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 KIR2DS4P43632 304 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 DOC2BQ14184 412 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 KIR2DS1Q14954 304 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CDK5R1Q15078 307 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 AADACL3Q5VUY0 350 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 OR4D11Q8NGI4 311 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 SMIM19Q96E16 107 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CHCHD2Q9Y6H1 151 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-202ENST00000306042 AQP7O14520 342 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
PTPRE-202ENST00000306042 H2AFB2P0C5Z0 115 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CD53P19397 219 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 F2RL1P55085 397 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 CDK5Q00535 292 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 MGAT2Q10469 447 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 PEAR1Q5VY43 1037 aaPredicted RBP8.2□□□□□ -1.1
PTPRE-202ENST00000306042 GDPD1Q8N9F7 314 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 SECTM1Q8WVN6 248 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 SLC7A6Q92536 515 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 PTP4A1Q93096 173 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 FAM234AQ9H0X4 552 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 PPP1R3CQ9UQK1 317 aa8.2□□□□□ -1.1
PTPRE-202ENST00000306042 RALGAPA1Q6GYQ0 2036 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 NOTCH4Q99466 2003 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 FXYD6-FXYD2A0A087WZ82 144 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 SULT1B1O43704 296 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 MPZL1O95297 269 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 CD79BP40259 229 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 TAS2R19P59542 299 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 RTP5Q14D33 572 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 ETFDHQ16134 617 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 DMRTC1Q5HYR2 192 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 UBE2UQ5VVX9 321 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 Q8IYB0 196 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 DMBX1Q8NFW5 382 aa8.19□□□□□ -1.1
PTPRE-202ENST00000306042 FAM57AQ8TBR7 257 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms