RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 FREM1Q5H8C1 2179 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 MED12LQ86YW9 2145 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 URB1O60287 2271 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 LOC100289279A0A1B0GTE1 492 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 C5orf63A6NC05 138 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 MBD3L4A6NDZ8 208 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 MBD3L3A6NE82 208 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 MBD3L5A6NJ08 208 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 DHRS7CA6NNS2 312 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 TPOP07202 933 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 THBS4P35443 961 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 KIR2DL2P43627 348 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 HGFACQ04756 655 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 C1orf100Q5SVJ3 147 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 CCDC36Q8IYA8 594 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 OR51D1Q8NGF3 324 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 MBD3L2Q8NHZ7 208 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 ZCCHC14Q8WYQ9 949 aaKnown RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 PP6455Q8WZ26 134 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 REEP6Q96HR9 211 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 UQCC2Q9BRT2 126 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 ZNF71Q9NQZ8 489 aaPredicted RBP13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 RHBDL2Q9NX52 303 aa13.69□□□□□ -0.22
HERPUD1-201ENST00000300302 ARSBP15848 533 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 STOMP27105 288 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 POU3F4P49335 361 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 INPP1P49441 399 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 GSG1Q2KHT4 349 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 EIF2S3LQ2VIR3 472 aaKnown RBP13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 HIKESHIQ53FT3 197 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 CDH26Q8IXH8 852 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 HAVCR1Q96D42 359 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 METTL17Q9H7H0 456 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 TBCCD1Q9NVR7 557 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 CGGBP1Q9UFW8 167 aaPredicted RBP13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 PIGLQ9Y2B2 252 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 SPTBN4Q9H254 2564 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 PIEZO1Q92508 2521 aa13.68□□□□□ -0.22
HERPUD1-201ENST00000300302 XRCC2O43543 280 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 HLA-DQB1P01920 261 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 CRHP06850 196 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 HOXD4P09016 255 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 TBRG1Q3YBR2 411 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 ZNF324BQ6AW86 544 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 SEMA6DQ8NFY4 1073 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 OR52N4Q8NGI2 321 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 C15orf40Q8WUR7 153 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 AKAP1Q92667 903 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■□□□□ 9.6
HERPUD1-201ENST00000300302 SLC25A28Q96A46 364 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 C1QTNF5Q9BXJ0 243 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 PLSCR4Q9NRQ2 329 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 MRPS7Q9Y2R9 242 aaKnown RBP13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 CEP295Q9C0D2 2601 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 CIB4A0PJX0 185 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 ALDOBP05062 364 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 IGHV1-2P23083 117 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 ZNF93P35789 620 aaPredicted RBP13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 MAP2K3P46734 347 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 C1orf185Q5T7R7 199 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 VWA1Q6PCB0 445 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 CD163Q86VB7 1156 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 OR2AE1Q8NHA4 323 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 FAM57AQ8TBR7 257 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 PHF21AQ96BD5 680 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 ABHD1Q96SE0 405 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 TUBD1Q9UJT1 453 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 TBC1D24Q9ULP9 559 aa13.67□□□□□ -0.22
HERPUD1-201ENST00000300302 LOC100509620A0A075B734 347 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 C5orf49A4QMS7 147 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 ZNF503-AS2A6NEH8 195 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 TPPPO94811 219 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 ALX3O95076 343 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 HCKP08631 526 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 CCNOP22674 350 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 MMP15P51511 669 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 UBE2NP61088 152 aaKnown RBP13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 RIPPLY1Q0D2K3 151 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 ASAH1Q13510 395 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 TAB1Q15750 504 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 TMEM69Q5SWH9 247 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 UTS2BQ765I0 119 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 Q8NA96 180 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 RFT1Q96AA3 541 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 ZFP3Q96NJ6 502 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 THAP7Q9BT49 309 aaPredicted RBP13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 CHST5Q9GZS9 411 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 CNTD2Q9H8S5 307 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 NOX3Q9HBY0 568 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 B3GNT2Q9NY97 397 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 PROCRQ9UNN8 238 aa13.66□□□□□ -0.22
HERPUD1-201ENST00000300302 CTDSPLO15194 276 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 IL2RAP01589 272 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 FAM87AP0C7U9 286 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 FAHP16930 419 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 APLNRP35414 380 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms