RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 SGK3Q96BR1 496 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 TUBA4BQ9H853 241 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 DNAJB11Q9UBS4 358 aa11.61□□□□□ -0.55
TVP23A-201ENST00000299866 PRSS38A1L453 326 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 PRR19A6NJB7 356 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 ST8SIA5O15466 376 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 FGF19O95750 216 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 PRH1P02810 166 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 CD63P08962 238 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 LYL1P12980 280 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 TMEM33P57088 247 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 RAB38P57729 211 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 GAB4Q2WGN9 574 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 ANGPTL5Q86XS5 388 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 PNLDC1Q8NA58 520 aaKnown RBP11.6□□□□□ -0.55
TVP23A-201ENST00000299866 OR10D4PQ8NGN7 298 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 PATE1Q8WXA2 126 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 HOXB13Q92826 284 aaPredicted RBP11.6□□□□□ -0.55
TVP23A-201ENST00000299866 JSRP1Q96MG2 331 aaPredicted RBP11.6□□□□□ -0.55
TVP23A-201ENST00000299866 ST6GALNAC5Q9BVH7 336 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 BANF2Q9H503 90 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 KCNJ16Q9NPI9 418 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 SLC5A6Q9Y289 635 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 POMT1Q9Y6A1 747 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 R4GMQ9 66 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 IFITM10A6NMD0 228 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 TAAR5O14804 337 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 SOCS1O15524 211 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 SNCAP37840 140 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 CAMLGP49069 296 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 CEBPGP53567 150 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 IAH1Q2TAA2 248 aaPredicted RBP11.6□□□□□ -0.55
TVP23A-201ENST00000299866 DMRTC1Q5HYR2 192 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 DTWD2Q8NBA8 298 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 OR56B1Q8NGI3 324 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 OR52N5Q8NH56 324 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 OR1E3Q8WZA6 343 aa11.6□□□□□ -0.55
TVP23A-201ENST00000299866 C2orf74A8MZ97 194 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF708P17019 499 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 HOXA5P20719 270 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 PMELP40967 661 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 P2RY4P51582 365 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ROM1Q03395 351 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 SPEM2Q0P670 501 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 CCINQ13939 588 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF239Q16600 458 aaKnown RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 DCXRQ7Z4W1 244 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 DMRTC2Q8IXT2 367 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 PRR22Q8IZ63 422 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 OR1J1Q8NGS3 322 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 PTX4Q96A99 478 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 DGAT2Q96PD7 388 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 WISP1O95388 367 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 CXCR1P25024 350 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 OR3A2P47893 321 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 PPP1CAP62136 330 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ARFRP1Q13795 201 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 TOMM34Q15785 309 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF529Q6P280 563 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF440Q8IYI8 595 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 OR5H2Q8NGV7 314 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 VWCEQ96DN2 955 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 C14orf144Q96I85 54 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 RTBDNQ9BSG5 229 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 OR10A5Q9H207 317 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 GAR1Q9NY12 217 aaKnown RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ATXN7L1Q9ULK2 861 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 STARD10Q9Y365 291 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 JTBO76095 146 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 AMY2BP19961 511 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 NKAIN3Q8N8D7 197 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 BSCL2Q96G97 398 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 TGIF2Q9GZN2 237 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 PRO1933Q9H354 126 aa11.59□□□□□ -0.55
TVP23A-201ENST00000299866 FAM212BQ9NTI7 297 aaPredicted RBP11.59□□□□□ -0.55
TVP23A-201ENST00000299866 H0Y8X5 98 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 SCDO00767 359 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF264O43296 627 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 TNFSF14O43557 240 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF217O75362 1048 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 RAP1AP62834 184 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ZNF674Q2M3X9 581 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 C14orf28Q4W4Y0 310 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 FAM78AQ5JUQ0 283 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 FIP1L1Q6UN15 594 aaKnown RBP11.58□□□□□ -0.56
TVP23A-201ENST00000299866 SFTPA2Q8IWL1 248 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ARRDC1Q8N5I2 433 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 METTL27Q8N6F8 245 aaPredicted RBP11.58□□□□□ -0.56
TVP23A-201ENST00000299866 MR1Q95460 341 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ERGIC1Q969X5 290 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ADAT3Q96EY9 351 aaPredicted RBP11.58□□□□□ -0.56
TVP23A-201ENST00000299866 ASB16Q96NS5 453 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 CNTNAP3Q9BZ76 1288 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 G6PC2Q9NQR9 355 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 DOK5Q9P104 306 aa11.58□□□□□ -0.56
TVP23A-201ENST00000299866 MEMO1Q9Y316 297 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms