RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 GPR84Q9NQS5 396 aa12.51□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
C9orf3-202ENST00000297979 KLK13Q9UKR3 277 aa12.51□□□□□ -0.41
C9orf3-202ENST00000297979 DNAJC13O75165 2243 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 SGCEO43556 437 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 ALX3O95076 343 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 IGHV3-9P01782 118 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 APOC1P02654 83 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 YES1P07947 543 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 CCL1P22362 96 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 SLC6A9P48067 706 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 ART1P52961 327 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 SPTSSAQ969W0 71 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 ADAT3Q96EY9 351 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-202ENST00000297979 PGAM5Q96HS1 289 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 THAP7Q9BT49 309 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-202ENST00000297979 SLC7A10Q9NS82 523 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 MRPS7Q9Y2R9 242 aaKnown RBP12.5□□□□□ -0.41
C9orf3-202ENST00000297979 PRSS44E7EML9 344 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 IGHG3P01860 377 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 ATF4P18848 351 aaPredicted RBP12.5□□□□□ -0.41
C9orf3-202ENST00000297979 ANOS1P23352 680 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 SPOCK1Q08629 439 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 NRN1LQ496H8 165 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 FAM166AQ6J272 317 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 TRIM63Q969Q1 353 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 S100A16Q96FQ6 103 aaKnown RBP12.5□□□□□ -0.41
C9orf3-202ENST00000297979 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
C9orf3-202ENST00000297979 CEP250Q9BV73 2442 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 M0R135 149 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 SYNGR3O43761 229 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 CD37P11049 281 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF20P17024 532 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF32P17041 273 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 GSK3AP49840 483 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 PCBD1P61457 104 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ECH1Q13011 328 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 RSPO1Q2MKA7 263 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 C1orf185Q5T7R7 199 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF813Q6ZN06 617 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 DOK3Q7L591 496 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 IZUMO1Q8IYV9 350 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 SLC7A6Q92536 515 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 HAVCR1Q96D42 359 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF799Q96GE5 643 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ZFP3Q96NJ6 502 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 TINAGL1Q9GZM7 467 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 DCDC2BA2VCK2 349 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 EEF1E1O43324 174 aaKnown RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 FARS2O95363 451 aaKnown RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 DDOSTP39656 456 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 MMP15P51511 669 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 GNG2P59768 71 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 NHLH1Q02575 133 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 GFOD2Q3B7J2 385 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF57Q68EA5 555 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 NAA40Q86UY6 237 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 OR51D1Q8NGF3 324 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 APH1AQ96BI3 265 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 FAM3DQ96BQ1 224 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 FAM71F1Q96KD3 344 aaPredicted RBP12.49□□□□□ -0.41
C9orf3-202ENST00000297979 NEDD4LQ96PU5 975 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 SLC17A5Q9NRA2 495 aa12.49□□□□□ -0.41
C9orf3-202ENST00000297979 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF587BE7ETH6 402 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 RPL36A-HNRNPH2H7BZ11 118 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 CTDSPLO15194 276 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 DBHP09172 617 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 CRYGSP22914 178 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 HTR2CP28335 458 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 BDKRB2P30411 391 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 MAP2K3P46734 347 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 FOXC1Q12948 553 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 HACD4Q5VWC8 232 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF774Q6NX45 483 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 MEX3BQ6ZN04 569 aaKnown RBP12.48□□□□□ -0.41
C9orf3-202ENST00000297979 NLRC3Q7RTR2 1065 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 ZADH2Q8N4Q0 377 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 OR5D14Q8NGL3 314 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 OR1F12Q8NHA8 337 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 CGGBP1Q9UFW8 167 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-202ENST00000297979 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 LOC390937A0A1W2PQ73 354 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 LANCL1O43813 399 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 IGLV3-1P01715 115 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 ACAA1P09110 424 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-202ENST00000297979 GLYATL3Q5SZD4 288 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 JAGN1Q8N5M9 183 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 OR1M1Q8NGA1 313 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 FOXRED1Q96CU9 486 aaPredicted RBP12.48□□□□□ -0.41
C9orf3-202ENST00000297979 SOX7Q9BT81 388 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 TMEM138Q9NPI0 162 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 ZNF175Q9Y473 711 aa12.48□□□□□ -0.41
C9orf3-202ENST00000297979 A0A0U1RQV5 110 aa12.47□□□□□ -0.41
C9orf3-202ENST00000297979 E9PLN8 166 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms