RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 NPIPA2E9PIF3 369 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 NPIPA3F8WFD2 350 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 KCNAB3O43448 404 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 OR2A4O95047 310 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 IGHV3-9P01782 118 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 PMP2P02689 132 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 HCKP08631 526 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 CPN1P15169 458 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 HRH1P35367 487 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 TAS2R19P59542 299 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 OPCMLQ14982 345 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 SNAI3Q3KNW1 292 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
RHO-201ENST00000296271 ZNF529Q6P280 563 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 NAXEQ8NCW5 288 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 SLC25A43Q8WUT9 341 aaPredicted RBP10.36□□□□□ -0.75
RHO-201ENST00000296271 OR2A7Q96R45 310 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 HES7Q9BYE0 225 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 LPAR5Q9H1C0 372 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 FN3KRPQ9HA64 309 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 GPN1Q9HCN4 374 aaPredicted RBP10.36□□□□□ -0.75
RHO-201ENST00000296271 TAS2R8Q9NYW2 309 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 TCFL5Q9UL49 500 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 KIAA1549Q9HCM3 1950 aa10.36□□□□□ -0.75
RHO-201ENST00000296271 OR14I1A6ND48 311 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ADH6P28332 368 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 CD96P40200 585 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 DSCR4P56555 118 aaPredicted RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 TMEM50BP56557 158 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 CLDN15P56746 228 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 B3GALT5-AS1P59052 145 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 CXADRP78310 365 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 SORDQ00796 357 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 HGFACQ04756 655 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 EXT1Q16394 746 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 LY6G6FQ5SQ64 297 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 SPINK14Q6IE38 97 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 C11orf88Q6PI97 169 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 SLC23A3Q6PIS1 610 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ZNF584Q8IVC4 421 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 COL27A1Q8IZC6 1860 aaPredicted RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 TMEM123Q8N131 208 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ESX1Q8N693 406 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 NKAIN3Q8N8D7 197 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 TMEM229BQ8NBD8 167 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ADAD2Q8NCV1 583 aaKnown RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 ADPRHL1Q8NDY3 354 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 M1APQ8TC57 530 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 CT55Q8WUE5 264 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 SEC22AQ96IW7 307 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 SFXN2Q96NB2 322 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ALKBH3Q96Q83 286 aaPredicted RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 RAB22AQ9UL26 194 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 MRPS28Q9Y2Q9 187 aaKnown RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 TMA7Q9Y2S6 64 aaKnown RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 CACNA1HO95180 2353 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 OR2AT4A6NND4 320 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 M0R233 179 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 TRAPPC6AO75865 159 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ACTBP60709 375 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ACTG1P63261 375 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 LRRC37A5PQ49AS3 106 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 OR14K1Q8NGZ2 314 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 OR14L1PQ8NHC6 308 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 PIGTQ969N2 578 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 MED30Q96HR3 178 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 PGAM5Q96HS1 289 aa10.35□□□□□ -0.75
RHO-201ENST00000296271 ZNF845Q96IR2 970 aaPredicted RBP10.35□□□□□ -0.75
RHO-201ENST00000296271 MCRIP1C9JLW8 97 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 CXCL13O43927 109 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 PMS2P2O95744 297 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 GIPP09681 153 aaPredicted RBP10.34□□□□□ -0.75
RHO-201ENST00000296271 ZNF250P15622 560 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 PI3P19957 117 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 UBE2V2Q15819 145 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 THOC7Q6I9Y2 204 aaKnown RBP10.34□□□□□ -0.75
RHO-201ENST00000296271 RHOUQ7L0Q8 258 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 FGFBP3Q8TAT2 258 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 TMEM41AQ96HV5 264 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 DMRTA2Q96SC8 542 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 GPER1Q99527 375 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 CST11Q9H112 138 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 EMC3Q9P0I2 261 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 FOXJ2Q9P0K8 574 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 CCDC187A0A096LP49 1063 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 UBE2QL1A1L167 161 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 LRRC3CA6NJW4 275 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 TMEM14DPA8MWL7 114 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 DHHO43323 396 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 CRTAPO75718 401 aaPredicted RBP10.34□□□□□ -0.75
RHO-201ENST00000296271 SCO1O75880 301 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 PLATP00750 562 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 CELA3AP09093 270 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 MSR1P21757 451 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 NFYAP23511 347 aaPredicted RBP10.34□□□□□ -0.75
RHO-201ENST00000296271 DHRS2Q13268 280 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms