RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CCDC54Q8NEL0 328 aa19.88■□□□□ 0.77
PTX3-201ENST00000295927 OR52N4Q8NGI2 321 aa19.88■□□□□ 0.77
PTX3-201ENST00000295927 OR6M1Q8NGM8 313 aa19.88■□□□□ 0.77
PTX3-201ENST00000295927 FAM3DQ96BQ1 224 aa19.88■□□□□ 0.77
PTX3-201ENST00000295927 REEP6Q96HR9 211 aa19.88■□□□□ 0.77
PTX3-201ENST00000295927 ABCG5Q9H222 651 aa19.88■□□□□ 0.77
PTX3-201ENST00000295927 PIEZO1Q92508 2521 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 SULT1B1O43704 296 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 MTRF1O75570 445 aaKnown RBP19.87■□□□□ 0.77
PTX3-201ENST00000295927 ART1P52961 327 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 PER3P56645 1201 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 DEFA1P59665 94 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 DEFA3P59666 94 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 PLA2G7Q13093 441 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 C2orf76Q3KRA6 126 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 LINC00303Q3SY05 128 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 PYHIN1Q6K0P9 492 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 DPPA2Q7Z7J5 298 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 FOXRED1Q96CU9 486 aaPredicted RBP19.87■□□□□ 0.77
PTX3-201ENST00000295927 ABHD1Q96SE0 405 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 TBC1D24Q9ULP9 559 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 FAM215AQ9Y5M1 114 aa19.87■□□□□ 0.77
PTX3-201ENST00000295927 CNOT4O95628 575 aaKnown RBP19.86■□□□□ 0.77
PTX3-201ENST00000295927 STOMP27105 288 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 POU3F4P49335 361 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 SCN1BQ07699 218 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 OR5AS1Q8N127 324 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 RAB40AQ8WXH6 277 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 C1QTNF5Q9BXJ0 243 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 RHBDL2Q9NX52 303 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 RHBDD3Q9Y3P4 386 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 hCG_2014768A0A024R1R8 64 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 FIGNL2A6NMB9 653 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 MAGEB3O15480 346 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 TNFSF13O75888 250 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 TOXO94900 526 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 OCMP0CE72 109 aaPredicted RBP19.86■□□□□ 0.77
PTX3-201ENST00000295927 FAHP16930 419 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 PTGER4P35408 488 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 THBS4P35443 961 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 NR4A2P43354 598 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 TDGF1P3P51864 188 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 TGFBR3Q03167 851 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 TAB1Q15750 504 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 GSG1Q2KHT4 349 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 C1orf185Q5T7R7 199 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 MINDY2Q8NBR6 621 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 FAM57AQ8TBR7 257 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 NANOS1Q8WY41 292 aaKnown RBP19.86■□□□□ 0.77
PTX3-201ENST00000295927 COX4I2Q96KJ9 171 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 SORCS2Q96PQ0 1159 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 KCNK15Q9H427 330 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 PLSCR4Q9NRQ2 329 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 PIGLQ9Y2B2 252 aa19.86■□□□□ 0.77
PTX3-201ENST00000295927 MRPS7Q9Y2R9 242 aaKnown RBP19.86■□□□□ 0.77
PTX3-201ENST00000295927 INTS1Q8N201 2190 aaKnown RBP19.85■□□□□ 0.77
PTX3-201ENST00000295927 LOC100289279A0A1B0GTE1 492 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 C5orf49A4QMS7 147 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 C1QTNF9BB2RNN3 333 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 LYZL6O75951 148 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 ERCC1P07992 297 aaPredicted RBP19.85■□□□□ 0.77
PTX3-201ENST00000295927 C1QTNF9P0C862 333 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 CCL2P13500 99 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 CCNOP22674 350 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 PLP2Q04941 152 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 BAIAP2L2Q6UXY1 529 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 COLCA1Q6ZS62 124 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 ZNF584Q8IVC4 421 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 IZUMO1Q8IYV9 350 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 OR4D6Q8NGJ1 314 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 HAVCR1Q96D42 359 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 S100A16Q96FQ6 103 aaKnown RBP19.85■□□□□ 0.77
PTX3-201ENST00000295927 METTL17Q9H7H0 456 aaPredicted RBP19.85■□□□□ 0.77
PTX3-201ENST00000295927 CNTD2Q9H8S5 307 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 PIEZO2Q9H5I5 2752 aa19.85■□□□□ 0.77
PTX3-201ENST00000295927 RAD51DO75771 328 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 EDN3P14138 238 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 TRIQKQ629K1 86 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 SETD6Q8TBK2 473 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 C10orf35Q96D05 121 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 STARD4Q96DR4 205 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 ZNF391Q9UJN7 358 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 BSNQ9UPA5 3926 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 LINC00854A0A1B0GVQ3 168 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 ARSBP15848 533 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 EFNB2P52799 333 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 MDP1Q86V88 176 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 RPRMLQ8N4K4 120 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 SEMA6DQ8NFY4 1073 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 POM121L2Q96KW2 1035 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 UQCC2Q9BRT2 126 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 RGCCQ9H4X1 137 aa19.84■□□□□ 0.77
PTX3-201ENST00000295927 IGKV1-9A0A0C4DH69 117 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 TMEM272A0A1B0GTI8 110 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 CIB4A0PJX0 185 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 PTTG1O95997 202 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 HLA-DQB1P01920 261 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 TMIGD3P0DMS9 266 aaPredicted RBP19.83■□□□□ 0.77
PTX3-201ENST00000295927 ACKR3P25106 362 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 PITPNAQ00169 270 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms