RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 FAM58AQ8N1B3 248 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 SPICQ8N5J4 248 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 OR51A4Q8NGJ6 313 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 ASB13Q8WXK3 278 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 TSLPQ969D9 159 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 OCIAD1Q9NX40 245 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 AK3Q9UIJ7 227 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 LOC105371267A0A1B0GV96 52 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 GATCO43716 136 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 EIF4E2O60573 245 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 EIF1BO60739 113 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 MRPL33O75394 65 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 APOA2P02652 100 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 PPICP45877 212 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 PPIAP62937 165 aaKnown RBP10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 C12orf73Q69YU5 71 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 OGFOD3Q6PK18 319 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 EXD3Q8N9H8 876 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 RXFP4Q8TDU9 374 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 DDA1Q9BW61 102 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 MMP26Q9NRE1 261 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 NTMQ9P121 344 aa10.27□□□□□ -0.77
NPC1L1-201ENST00000289547 PRAMEF27A3QJZ7 478 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 HLA-HP01893 362 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 PRAMEF9Q5VWM5 478 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 RTL6Q6ICC9 239 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SEZ6L2Q6UXD5 910 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 VASH2Q86V25 355 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 MUC20Q8N307 709 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ZSCAN4Q8NAM6 433 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 MITD1Q8WV92 249 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 EID2BQ96D98 161 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ZC3HAV1LQ96H79 300 aaKnown RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 BCO1Q9HAY6 547 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 MYO16Q9Y6X6 1858 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 MDFIC2A0A1B0GVS7 189 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 OR6C68A6NDL8 312 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ST8SIA3O43173 380 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 GLCEO94923 617 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 LINC00271P0C7V0 271 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 LIMS3P0CW19 117 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 LIMS4P0CW20 117 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF728P0DKX0 622 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ALOX5APP20292 161 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SNCAP37840 140 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 MELKQ14680 651 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 PWWP2BQ6NUJ5 590 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 FJX1Q86VR8 437 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC22A24Q8N4F4 322 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 C19orf53Q9UNZ5 99 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 HMSDA8MTL9 139 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF727A8MUV8 499 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 G3V3Y1 287 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 P2RY10O00398 339 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 HPXP02790 462 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 NFYBP25208 207 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 OR2A2Q6IF42 318 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 LYG2Q86SG7 212 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC22A18ASQ8N1D0 253 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 PRR18Q8N4B5 295 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF611Q8N823 705 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 OR5AP2Q8NGF4 316 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 OR5M9Q8NGP3 310 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 GPR119Q8TDV5 335 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SLC25A43Q8WUT9 341 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 GPR137Q96N19 417 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 PLA2G12AQ9BZM1 189 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 FAM166BA8MTA8 275 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 PHF1O43189 567 aaPredicted RBP10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 FGF17O60258 216 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 LCATP04180 440 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SULT1A3P0DMM9 295 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SULT1A4P0DMN0 295 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 SHEQ5VZ18 495 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 MFSD12Q6NUT3 480 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 GFRALQ6UXV0 394 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 TMEM64Q6YI46 380 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 DPY19L2P2Q6ZN68 376 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 FGGYQ96C11 551 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF75AQ96N20 296 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 CTSFQ9UBX1 484 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 OSGIN2Q9Y236 505 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 B3GALT5Q9Y2C3 310 aa10.26□□□□□ -0.77
NPC1L1-201ENST00000289547 A0A1W2PR77 199 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 MT-CO2P00403 227 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 IL2RAP01589 272 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 FABP6P51161 128 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 CARD18P57730 90 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 GUK1Q16774 197 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TMEM176BQ3YBM2 270 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 PHLDA2Q53GA4 152 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 STPG2Q8N412 459 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ZNF808Q8N4W9 903 aaPredicted RBP10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 OR2G2Q8NGZ5 317 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 ISOC2Q96AB3 205 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 POM121Q96HA1 1249 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 DUSP22Q9NRW4 184 aa10.25□□□□□ -0.77
NPC1L1-201ENST00000289547 TMEM74BQ9NUR3 256 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms