RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 MIDNQ504T8 468 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 KCND3Q9UK17 655 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 STRAPQ9Y3F4 350 aaKnown RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 ARL2-SNX15V9GYD0 113 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 TUBGCP6Q96RT7 1819 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 M0R135 149 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 IGHA2P01877 340 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 THBS3P49746 956 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 RAB1AP62820 205 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 THEM4Q5T1C6 240 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 ETFRF1Q6IPR1 90 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 FBXO46Q6PJ61 603 aaPredicted RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 PHOSPHO2Q8TCD6 241 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF799Q96GE5 643 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 EXOGQ9Y2C4 368 aaKnown RBP13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 CXCL3P19876 107 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 OR51I2Q9H344 312 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 TXNIPQ9H3M7 391 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 PCDHB10Q9UN67 800 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 ZNF90Q03938 601 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 ABHD1Q96SE0 405 aa13.84□□□□□ -0.19
SHROOM4-201ENST00000289292 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.19
SHROOM4-201ENST00000289292 OR5H8P0DN80 308 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 UBE2G2P60604 165 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 WDR38Q5JTN6 314 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 DCAF12Q5T6F0 453 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 TP53I13Q8NBR0 393 aaPredicted RBP13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 IL20Q9NYY1 176 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 OR5V1Q9UGF6 321 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 LHX6Q9UPM6 363 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 C5orf49A4QMS7 147 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 WDR1O75083 606 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 NRASP01111 189 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 CEACAM5P06731 702 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 SIGLEC7Q9Y286 467 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 A0A1W2PPQ1 181 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 FAHP16930 419 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 TBXA2RP21731 343 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 PMP22Q01453 160 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 FABP9Q0Z7S8 132 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 PELI1Q96FA3 418 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 MIXL1Q9H2W2 232 aa13.83□□□□□ -0.2
SHROOM4-201ENST00000289292 AQP7P3A6NL99 342 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 CD46P15529 392 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 GFERP55789 205 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 TCTN1Q2MV58 587 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 B3GNTL1Q67FW5 361 aaPredicted RBP13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 LHFPL2Q6ZUX7 228 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 GLRA1P23415 457 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 MEOX2P50222 304 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 PPP1R1AQ13522 171 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 VAMP3Q15836 100 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 C21orf62-AS1Q17RA5 79 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 C20orf196Q8IYI0 205 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 TOX2Q96NM4 488 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 ESRP2Q9H6T0 727 aaKnown RBP13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 PPP1R14DQ9NXH3 145 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 HS3ST3A1Q9Y663 406 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 ANGPTL7O43827 346 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 TMEM267Q0VDI3 215 aaPredicted RBP13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 SIGLECL1Q8N7X8 197 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 OR11H7Q8NGC8 314 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 OR4D11Q8NGI4 311 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 CCDC74AQ96AQ1 378 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 PSENENQ9NZ42 101 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 PLPP2O43688 288 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 CST7O76096 145 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 IL5P05113 134 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 FGF9P31371 208 aaPredicted RBP13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 KRTDAPP60985 99 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 TBC1D28Q2M2D7 210 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 PRSS41Q7RTY9 318 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 DYNLRB1Q9NP97 96 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 PRDM7Q9NQW5 492 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 RNF150Q9ULK6 438 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 LAMP3Q9UQV4 416 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 FMODQ06828 376 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 C8orf82Q6P1X6 216 aaPredicted RBP13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 ABI3BPQ7Z7G0 1075 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 SKA3Q8IX90 412 aa13.82□□□□□ -0.2
SHROOM4-201ENST00000289292 METTL15P1P0C7V9 234 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 PPICP45877 212 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 CASP6P55212 293 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 FAM24BQ8N5W8 94 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SCCPDHQ8NBX0 429 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 AGBL5Q8NDL9 886 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 OR52N4Q8NGI2 321 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC17A4Q9Y2C5 497 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 CDC42EP2O14613 210 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 GABRA4P48169 554 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 FOXF1Q12946 379 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 ZNF626Q68DY1 528 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 THSD4Q6ZMP0 1018 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 UBAC2Q8NBM4 344 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 BTF3L4Q96K17 158 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SMIM7Q9BQ49 75 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 IL21Q9HBE4 155 aa13.81□□□□□ -0.2
SHROOM4-201ENST00000289292 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms