RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 SLC26A10Q8NG04 563 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OR5T1Q8NG75 326 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OR52I1Q8NGK6 324 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OR2T27Q8NH04 317 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MED28Q9H204 178 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 NELFAQ9H3P2 528 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CHODLQ9H9P2 273 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 GCM1Q9NP62 436 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ISYNA1Q9NPH2 558 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM129A0AVI4 362 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 C12orf71A8MTZ7 269 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CALCBP10092 127 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 HOXB1P14653 301 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CTLA4P16410 223 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 JUNBP17275 347 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ACTA2P62736 377 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ACTG2P63267 376 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ACSM1Q08AH1 577 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 PRR30Q53SZ7 412 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 TFAP2EQ6VUC0 442 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SYT9Q86SS6 491 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC35F2Q8IXU6 374 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 S100A16Q96FQ6 103 aaKnown RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SDSLQ96GA7 329 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 PLPPR2Q96GM1 343 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MND1Q9BWT6 205 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 HIPK2Q9H2X6 1198 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 GPR35Q9HC97 309 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MOV10Q9HCE1 1003 aaKnown RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ANKHD1Q8IWZ3 2542 aaKnown RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 DHHO43323 396 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CGAP01215 116 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CST2P09228 141 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 QDPRP09417 244 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SBK2P0C263 348 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 GLI4P10075 376 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CTSSP25774 331 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MRPS34P82930 218 aaKnown RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 EGR3Q06889 387 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 LY6DQ14210 128 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 GRK1Q15835 563 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 FAM189A2Q15884 450 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF829Q3KNS6 432 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF704Q6ZNC4 412 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SEM1Q6ZVN7 128 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ST7LQ8TDW4 575 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 INTS14Q96SY0 518 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OR10A2Q9H208 303 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 PLEKHJ1Q9NW61 149 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 PAK1IP1Q9NWT1 392 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF629Q9UEG4 869 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ATPIF1Q9UII2 106 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ASPMQ8IZT6 3477 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ARPC4-TTLL3A0A0A6YYG9 625 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 TOR1AO14656 332 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 TMIGD3P0DMS9 266 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 GTF2F2P13984 249 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MAPK3P27361 379 aaPredicted RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OPRM1P35372 400 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 HIST1H3AP68431 136 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SMN1Q16637 294 aaKnown RBP7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 HIST2H3PS2Q5TEC6 136 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 FBXW9Q5XUX1 488 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 HIST2H3AQ71DI3 136 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF367Q7RTV3 350 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 C17orf78Q8N4C9 275 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OR52N1Q8NH53 320 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 ST6GALNAC5Q9BVH7 336 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MED20Q9H944 212 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 MEMO1Q9Y316 297 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 TRAPPC2LH3BP13 241 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 TNFSF13O75888 250 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 WISP2O76076 250 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 CNIH1O95406 144 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 GSTT2P0CG29 244 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 GSTT2BP0CG30 244 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 SMIM18P0DKX4 95 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 SERPINA2P20848 420 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 MSR1P21757 451 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 SPOCK1Q08629 439 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 MEX3BQ6ZN04 569 aaKnown RBP7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF584Q8IVC4 421 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 SYS1Q8N2H4 156 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 TOMM5Q8N4H5 51 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 NABP1Q96AH0 204 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 POLE4Q9NR33 117 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM38BQ9NVV0 291 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 OSGIN2Q9Y236 505 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF99A8MXY4 864 aaPredicted RBP7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF732B4DXR9 585 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 COX5AP20674 150 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 KIR2DL2P43627 348 aaPredicted RBP7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 RGS21Q2M5E4 152 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 PHYHD1Q5SRE7 291 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 SPATA46Q5T0L3 261 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 KCTD20Q7Z5Y7 419 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 OR51T1Q8NGJ9 327 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 ABHD4Q8TB40 342 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 KCNJ16Q9NPI9 418 aa7.4□□□□□ -1.22
PTPDC1-201ENST00000288976 HIF1ANQ9NWT6 349 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms