RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 ARGFXA6NJG6 315 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 P2RX1P51575 399 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 SRYQ05066 204 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 DLX2Q07687 328 aaPredicted RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 CRIPAKQ8N1N5 446 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 ATOH1Q92858 354 aaPredicted RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 CCDC74BQ96LY2 380 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 FAM103A1Q9BTL3 118 aaKnown RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 WWTR1Q9GZV5 400 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 A0A087X0M5 115 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 A0A1B0GX30 115 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 MCRIP1C9JLW8 97 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 BCL2L11O43521 198 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 DAOP14920 347 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 CARD18P57730 90 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 HYAL1Q12794 435 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 ARIH2OSQ8N7S6 290 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 OR5L1Q8NGL2 311 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 INTS12Q96CB8 462 aaKnown RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 DCBLD2Q96PD2 775 aa11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 NXT1Q9UKK6 140 aaKnown RBP11.32□□□□□ -0.6
SLC6A1-201ENST00000287766 SCN5AQ14524 2016 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 A0A1W2PNR3 127 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 A6NIZ1 184 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 XRCC2O43543 280 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 CLDN1O95832 211 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OTX2P32243 289 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 RAP1BP61224 184 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 RPL27P61353 136 aaKnown RBP11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 FAM53BQ14153 422 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OPN5Q6U736 354 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 SEZ6L2Q6UXD5 910 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ASB17Q8WXJ9 295 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 MEGF10Q96KG7 1140 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OR6C1Q96RD1 312 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ZNF286AQ9HBT8 521 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ANKRD10Q9NXR5 420 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 SPTA1P02549 2419 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 A8MVM7 634 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 TCAPO15273 167 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 KITLGP21583 273 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 H3F3AP84243 136 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ZNF528Q3MIS6 628 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OR2A2Q6IF42 318 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 GLDNQ6ZMI3 551 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 BATF2Q8N1L9 274 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ZPLD1Q8TCW7 415 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 SPTSSAQ969W0 71 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OPA3Q9H6K4 179 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 DOPEY2Q9Y3R5 2298 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ARHGEF17Q96PE2 2063 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 SPTY2D1-AS1A0A0U1RR47 76 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 MED19A0JLT2 244 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 SHISA3A0PJX4 238 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 C20orf202A1L168 122 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 TBX6O95947 436 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 ARG1P05089 322 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 CTSBP07858 339 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 FGF7P21781 194 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 C19orf57Q0VDD7 668 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 C9orf135Q5VTT2 229 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 GLIPR1L1Q6UWM5 242 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 SLC22A24Q8N4F4 322 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OR5AP2Q8NGF4 316 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 OR14A16Q8NHC5 309 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 PIGCQ92535 297 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 LRRC61Q9BV99 259 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 PPP1R3EQ9H7J1 279 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 FKRPQ9H9S5 495 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 GDF2Q9UK05 429 aaPredicted RBP11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 RAB22AQ9UL26 194 aa11.31□□□□□ -0.6
SLC6A1-201ENST00000287766 IGHV5-51A0A0C4DH38 117 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 SIGLEC5O15389 551 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 CALCBP10092 127 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 NAGAP17050 411 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 ACKR3P25106 362 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 PPICP45877 212 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 RAB1AP62820 205 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 PLGLB1Q02325 96 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 SIGLEC14Q08ET2 396 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 OR8G2PQ6IF36 304 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 ZNF574Q6ZN55 896 aaPredicted RBP11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 TMPPEQ6ZT21 453 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 SHDQ96IW2 340 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 KIRREL1Q96J84 757 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 BTF3L4Q96K17 158 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 FOXQ1Q9C009 403 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 HPXP02790 462 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 SLC6A1P30531 599 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 PSMB3P49720 205 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 MMP15P51511 669 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 NR0B2Q15466 257 aa11.3□□□□□ -0.6
SLC6A1-201ENST00000287766 CD226Q15762 336 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms