RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 FNDC9Q8TBE3 224 aa11.98□□□□□ -0.49
SCAF4-201ENST00000286835 SLAMF9Q96A28 289 aa11.98□□□□□ -0.49
SCAF4-201ENST00000286835 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
SCAF4-201ENST00000286835 CHRDQ9H2X0 955 aa11.98□□□□□ -0.49
SCAF4-201ENST00000286835 LRRK1Q38SD2 2015 aa11.98□□□□□ -0.49
SCAF4-201ENST00000286835 ZNF106Q9H2Y7 1883 aaKnown RBP11.98□□□□□ -0.49
SCAF4-201ENST00000286835 BDP1A6H8Y1 2624 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 TRBV5-7A0A0A0MS05 114 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 TNFSF14O43557 240 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SSX5O60225 188 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ZNF354AO60765 605 aaPredicted RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 CRHP06850 196 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 PPICP45877 212 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 HSD17B7P56937 341 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SKP2Q13309 424 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ZNF775Q96BV0 537 aaPredicted RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SLAMF6Q96DU3 332 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SLC46A1Q96NT5 459 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 PUS1Q9Y606 427 aaKnown RBP eCLIP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 TNFSF12O43508 249 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ABHD16AO95870 558 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 GLRA1P23415 457 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 RGS19P49795 217 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 MEOX2P50222 304 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 INSM1Q01101 510 aaPredicted RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 RPL7L1Q6DKI1 246 aaKnown RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 MOB3CQ70IA8 216 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 OR51F2Q8NH61 342 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 RXFP4Q8TDU9 374 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SDHAF3Q9NRP4 125 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 CUTCQ9NTM9 273 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 XIRP2A4UGR9 3374 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 VSTM2BA6NLU5 285 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ZNF205O95201 554 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ACTL6AO96019 429 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ASAH2BP0C7U1 165 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 CDAP32320 146 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 CBX5P45973 191 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 ID4P47928 161 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SNU13P55769 128 aaKnown RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 NKAIN3Q8N8D7 197 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 MCHR2Q969V1 340 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 S1PR5Q9H228 398 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 METTL7AQ9H8H3 244 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 LOC101059948A0A1B0GTJ6 334 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 A0A1W2PP11 408 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SULT2B1O00204 365 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 TMEM225BP0DP42 221 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 DUSP3P51452 185 aaPredicted RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 FAM69BQ5VUD6 431 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SHEQ5VZ18 495 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 SYT13Q7L8C5 426 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 TERB2Q8NHR7 220 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 RNASE11Q8TAA1 199 aaKnown RBP11.97□□□□□ -0.49
SCAF4-201ENST00000286835 RSRP1Q9BUV0 290 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 C1orf198Q9H425 327 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 FGF21Q9NSA1 209 aa11.97□□□□□ -0.49
SCAF4-201ENST00000286835 COL4A3Q01955 1670 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 RNF222A6NCQ9 220 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 RNASEK-C17orf49H0YIS7 233 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 OR13C7P0DN81 318 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 RCC1P18754 421 aaPredicted RBP11.96□□□□□ -0.49
SCAF4-201ENST00000286835 IL11P20809 199 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 SGCBQ16585 318 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 SLC25A42Q86VD7 318 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 BATF2Q8N1L9 274 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 OR2I1PQ8NGU4 316 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 ADAMTS18Q8TE60 1221 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 OR5B2Q96R09 309 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 SMCO4Q9NRQ5 59 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 FBXO7Q9Y3I1 522 aa11.96□□□□□ -0.49
SCAF4-201ENST00000286835 FOXS1O43638 330 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.5
SCAF4-201ENST00000286835 PJVKQ0ZLH3 352 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 CSRP2Q16527 193 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 IGSF11Q5DX21 431 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SULF2Q8IWU5 870 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SPEM1Q8N4L4 309 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 NEK7Q8TDX7 302 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 PIK3IP1Q96FE7 263 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 ALX4Q9H161 411 aaPredicted RBP11.96□□□□□ -0.5
SCAF4-201ENST00000286835 MRPL22Q9NWU5 206 aaKnown RBP11.96□□□□□ -0.5
SCAF4-201ENST00000286835 ASH2LQ9UBL3 628 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SPTY2D1-AS1A0A0U1RR47 76 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SOCS1O15524 211 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 TMEM127O75204 238 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 IL33O95760 270 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 OR8U9P0C7N5 309 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 OMGP23515 440 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 FCARP24071 287 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SSBP1Q04837 148 aaKnown RBP11.96□□□□□ -0.5
SCAF4-201ENST00000286835 UQCC3Q6UW78 93 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 MEX3BQ6ZN04 569 aaKnown RBP11.96□□□□□ -0.5
SCAF4-201ENST00000286835 SGPP2Q8IWX5 399 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 PIGTQ969N2 578 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 TCTN2Q96GX1 697 aa11.96□□□□□ -0.5
SCAF4-201ENST00000286835 DEFB126Q9BYW3 111 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms