RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 TMEM53Q6P2H8 277 aa16.58■□□□□ 0.24
VBP1-201ENST00000286428 SIAH3Q8IW03 269 aa16.58■□□□□ 0.24
VBP1-201ENST00000286428 SEMA6DQ8NFY4 1073 aa16.58■□□□□ 0.24
VBP1-201ENST00000286428 NANOS1Q8WY41 292 aaKnown RBP16.58■□□□□ 0.24
VBP1-201ENST00000286428 ACTR6Q9GZN1 396 aa16.58■□□□□ 0.24
VBP1-201ENST00000286428 WNT5BQ9H1J7 359 aa16.58■□□□□ 0.24
VBP1-201ENST00000286428 RBMX2Q9Y388 322 aaKnown RBP16.58■□□□□ 0.24
VBP1-201ENST00000286428 MED13Q9UHV7 2174 aa16.58■□□□□ 0.24
VBP1-201ENST00000286428 LDLRAD4O15165 306 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 XRCC2O43543 280 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 IGHV3-9P01782 118 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 MMP7P09237 267 aaPredicted RBP16.57■□□□□ 0.24
VBP1-201ENST00000286428 FAM157BP0CG42 384 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 MPGP29372 298 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 PRSS3P35030 304 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 BTG1P62324 171 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 PLP2Q04941 152 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 FAPQ12884 760 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 FBXW9Q5XUX1 488 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 OR2W3Q7Z3T1 314 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 NAA40Q86UY6 237 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 AKAP1Q92667 903 aaKnown RBP eCLIP16.57■□□□□ 0.24
VBP1-201ENST00000286428 NUDT16L1Q9BRJ7 211 aaKnown RBP16.57■□□□□ 0.24
VBP1-201ENST00000286428 SCPEP1Q9HB40 452 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 NUBP2Q9Y5Y2 271 aa16.57■□□□□ 0.24
VBP1-201ENST00000286428 OR14I1A6ND48 311 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 DHFRP00374 187 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 DBHP09172 617 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 PRF1P14222 555 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 AGTR1P30556 359 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 SRP9P49458 86 aaKnown RBP16.56■□□□□ 0.24
VBP1-201ENST00000286428 PMP22Q01453 160 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 RIPPLY1Q0D2K3 151 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 KLF9Q13886 244 aaPredicted RBP16.56■□□□□ 0.24
VBP1-201ENST00000286428 C3AR1Q16581 482 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 AWAT2Q6E213 333 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 DNM1P46Q6ZS02 220 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 ANGPTL5Q86XS5 388 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 OR52I2Q8NH67 350 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 AKR7LQ8NHP1 331 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 HPS1Q92902 700 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 FAM46BQ96A09 425 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 SGK3Q96BR1 496 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 REEP6Q96HR9 211 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 GPER1Q99527 375 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 CHST5Q9GZS9 411 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 TRAV18A0A075B6X5 111 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 CIB4A0PJX0 185 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 AHRRA9YTQ3 701 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 SS18L1O75177 396 aaPredicted RBP16.56■□□□□ 0.24
VBP1-201ENST00000286428 CHRM2P08172 466 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 CSF1P09603 554 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 HLA-DMAP28067 261 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 PABPC1L2AQ5JQF8 200 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 OR4D6Q8NGJ1 314 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 KCNG3Q8TAE7 436 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 SLC7A6Q92536 515 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 LYZL4Q96KX0 146 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 TECTBQ96PL2 329 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 PIGLQ9Y2B2 252 aa16.56■□□□□ 0.24
VBP1-201ENST00000286428 CFAP54Q96N23 3096 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 INMT-MINDY4F8WBC2 141 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 H7C417 338 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 CNOT4O95628 575 aaKnown RBP16.55■□□□□ 0.24
VBP1-201ENST00000286428 TGM6O95932 706 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 OR3A2P47893 321 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 RAG2P55895 527 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 ACTBP60709 375 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 ACTG1P63261 375 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 TGFBR3Q03167 851 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 PLA1AQ53H76 456 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 RNASE12Q5GAN4 147 aaKnown RBP16.55■□□□□ 0.24
VBP1-201ENST00000286428 OR2A2Q6IF42 318 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 NUFIP2Q7Z417 695 aaKnown RBP16.55■□□□□ 0.24
VBP1-201ENST00000286428 CCDC36Q8IYA8 594 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 DRAXINQ8NBI3 349 aaPredicted RBP16.55■□□□□ 0.24
VBP1-201ENST00000286428 SPSB1Q96BD6 273 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 PLSCR2Q9NRY7 297 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 MTFP1Q9UDX5 166 aa16.55■□□□□ 0.24
VBP1-201ENST00000286428 CNTRLQ7Z7A1 2325 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 ANKRD20A5PA0PJZ0 165 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 TMIGD3P0DMS9 266 aaPredicted RBP16.54■□□□□ 0.24
VBP1-201ENST00000286428 EFNB2P52799 333 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 PMPCAQ10713 525 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 CNN3Q15417 329 aaKnown RBP16.54■□□□□ 0.24
VBP1-201ENST00000286428 SNAI3Q3KNW1 292 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 RPUSD3Q6P087 351 aaKnown RBP16.54■□□□□ 0.24
VBP1-201ENST00000286428 ZNF101Q8IZC7 436 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 S100A13Q99584 98 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 CACNG6Q9BXT2 260 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 AUNIPQ9H7T9 357 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 CLCF1Q9UBD9 225 aa16.54■□□□□ 0.24
VBP1-201ENST00000286428 MRPS28Q9Y2Q9 187 aaKnown RBP16.54■□□□□ 0.24
VBP1-201ENST00000286428 HMX3A6NHT5 357 aa16.53■□□□□ 0.24
VBP1-201ENST00000286428 CRYABP02511 175 aaKnown RBP16.53■□□□□ 0.24
VBP1-201ENST00000286428 PRKACBP22694 351 aa16.53■□□□□ 0.24
VBP1-201ENST00000286428 TATDN3Q17R31 274 aa16.53■□□□□ 0.24
VBP1-201ENST00000286428 RSPO4Q2I0M5 234 aaPredicted RBP16.53■□□□□ 0.24
VBP1-201ENST00000286428 ZBTB37Q5TC79 503 aa16.53■□□□□ 0.24
VBP1-201ENST00000286428 Q6ZS92 163 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms