RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 PCDHGA1Q9Y5H4 931 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 H7C417 338 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 SGCEO43556 437 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 TOXO94900 526 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 MPIG6BO95866 241 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 TRAPPC2P0DI81 140 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 TRAPPC2BP0DI82 140 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 ZNF32P17041 273 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 CCNOP22674 350 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 MEOX1P50221 254 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 RSPO1Q2MKA7 263 aaPredicted RBP15.75■□□□□ 0.11
CAPN1-201ENST00000279247 SLC22A24Q8N4F4 322 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 PIGTQ969N2 578 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 GHITMQ9H3K2 345 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 MTFP1Q9UDX5 166 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 FABP7O15540 132 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 UBE2MP61081 183 aaKnown RBP15.75■□□□□ 0.11
CAPN1-201ENST00000279247 ARG2P78540 354 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 MAB21L1Q13394 359 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 UNC119Q13432 240 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 NKPD1Q17RQ9 610 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 SLC22A6Q4U2R8 563 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 GLIPR1L1Q6UWM5 242 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 NKAIN3Q8N8D7 197 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 TMEM104Q8NE00 496 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 OR52B4Q8NGK2 314 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 OR10K1Q8NGX5 313 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 NUDCD2Q8WVJ2 157 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 TMEM246Q9BRR3 403 aa15.75■□□□□ 0.11
CAPN1-201ENST00000279247 NOSIPQ9Y314 301 aaKnown RBP15.75■□□□□ 0.11
CAPN1-201ENST00000279247 TSC22D2O75157 780 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 VSIG8P0DPA2 414 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 CCL11P51671 97 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 PMP22Q01453 160 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 KCNMB1Q16558 191 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 Q6ZTK2 550 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 NCCRP1Q6ZVX7 275 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-201ENST00000279247 TUSC5Q8IXB3 177 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 GINS4Q9BRT9 223 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 COPZ2Q9P299 210 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 PEX14O75381 377 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 LCATP04180 440 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 GNB3P16520 340 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 HTR5AP47898 357 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 MRPS10P82664 201 aaKnown RBP15.74■□□□□ 0.11
CAPN1-201ENST00000279247 TSPO2Q5TGU0 170 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 PAQR4Q8N4S7 273 aaPredicted RBP15.74■□□□□ 0.11
CAPN1-201ENST00000279247 FER1L6-AS2Q96M78 137 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 FOXB1Q99853 325 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 SF3B5Q9BWJ5 86 aaKnown RBP15.74■□□□□ 0.11
CAPN1-201ENST00000279247 SELENOIQ9C0D9 397 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 OR2B2Q9GZK3 357 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 LDAHQ9H6V9 325 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 ZNF69Q9UC07 566 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 PIGLQ9Y2B2 252 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 LIPGQ9Y5X9 500 aa15.74■□□□□ 0.11
CAPN1-201ENST00000279247 ARID1AO14497 2285 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 MRPL33O75394 65 aaKnown RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 YES1P07947 543 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 NOVA1P51513 510 aaKnown RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 FOXG1P55316 489 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 SCGB2B2Q4G0G5 96 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 JMJD6Q6NYC1 403 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 SLC16A14Q7RTX9 510 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 GVQW1Q8N7I0 195 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 CPNE4Q96A23 557 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 C7orf50Q9BRJ6 194 aaKnown RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 MOB1AQ9H8S9 216 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 MRPS28Q9Y2Q9 187 aaKnown RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 AKR7A2O43488 359 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 PPIAP62937 165 aaKnown RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 OR5AS1Q8N127 324 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 SEH1LQ96EE3 360 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 PYCARD-AS1I3L0S3 204 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 HGFACQ04756 655 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 C1orf100Q5SVJ3 147 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 OR52W1Q6IF63 320 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 DOK3Q7L591 496 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 CD163Q86VB7 1156 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 TINAGL1Q9GZM7 467 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 MOV10Q9HCE1 1003 aaKnown RBP15.73■□□□□ 0.11
CAPN1-201ENST00000279247 TMEM38BQ9NVV0 291 aa15.73■□□□□ 0.11
CAPN1-201ENST00000279247 IGKV1-9A0A0C4DH69 117 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 METTL21EPA6NDL7 271 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 CRTAPO75718 401 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-201ENST00000279247 SP1P08047 785 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 LIPCP11150 499 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 CCL2P13500 99 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 LHX2P50458 406 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 MRPS34P82930 218 aaKnown RBP15.72■□□□□ 0.11
CAPN1-201ENST00000279247 Q5BKY6 102 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 OLFML2AQ68BL7 652 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 TMEM127O75204 238 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 FAM27BQ5VT28 67 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 GRPEL2Q8TAA5 225 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 C15orf40Q8WUR7 153 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 METTL17Q9H7H0 456 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-201ENST00000279247 HSPB11Q9Y547 144 aa15.72■□□□□ 0.11
CAPN1-201ENST00000279247 SCAND1P57086 179 aa15.71■□□□□ 0.11
CAPN1-201ENST00000279247 CDNFQ49AH0 187 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms