RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 ERGIC1Q969X5 290 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 REEP6Q96HR9 211 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 SMIM8Q96KF7 97 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 SNX22Q96L94 193 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 SOX7Q9BT81 388 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 OPA3Q9H6K4 179 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 PTGES2Q9H7Z7 377 aa11.46□□□□□ -0.57
HERC6-202ENST00000273960 DNAJB12Q9NXW2 375 aaKnown RBP11.46□□□□□ -0.57
HERC6-202ENST00000273960 A0A087WZY1 265 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 H0YL77 283 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 GEMIN2O14893 280 aaKnown RBP11.46□□□□□ -0.58
HERC6-202ENST00000273960 CNOT4O95628 575 aaKnown RBP11.46□□□□□ -0.58
HERC6-202ENST00000273960 APBB3O95704 486 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 AGR2O95994 175 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 HPGDP15428 266 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 APLNRP35414 380 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 DEFB110Q30KQ9 67 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 BTNL8Q6UX41 500 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 TMEM182Q6ZP80 229 aaPredicted RBP11.46□□□□□ -0.58
HERC6-202ENST00000273960 METTL27Q8N6F8 245 aaPredicted RBP11.46□□□□□ -0.58
HERC6-202ENST00000273960 SUMF2Q8NBJ7 301 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 SLC5A7Q9GZV3 580 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 RAB22AQ9UL26 194 aa11.46□□□□□ -0.58
HERC6-202ENST00000273960 WIPF3A6NGB9 483 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 CDRT15L2A8MXV6 281 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 B3GALT2O43825 422 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 RDH16O75452 317 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 NSA2O95478 260 aaKnown RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 KLF8O95600 359 aaPredicted RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 ABHD16AO95870 558 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 CD37P11049 281 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 OMGP23515 440 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 SP6Q3SY56 376 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 VN1R4Q7Z5H5 301 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 FGGYQ96C11 551 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 WFIKKN1Q96NZ8 548 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 TPSD1Q9BZJ3 242 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 EGLN1Q9GZT9 426 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 HSF4Q9ULV5 492 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 TRBV5-7A0A0A0MS05 114 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 SLC35G6P0C7Q6 338 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 OR3A2P47893 321 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 NKAIN1Q4KMZ8 207 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 CDRT4Q8N9R6 151 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 ZNF610Q8N9Z0 462 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 OR1J1Q8NGS3 322 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 RNF128Q8TEB7 428 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 HPSE2Q8WWQ2 592 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 LRFN5Q96NI6 719 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 ZNF426Q9BUY5 554 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 BRINP1O60477 761 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 CSTBP04080 98 aaKnown RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 CSRP1P21291 193 aaKnown RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 CMPK1P30085 196 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 PEBP1P30086 187 aaKnown RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 UBE2KP61086 200 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 GGTLC2Q14390 218 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 TOMM34Q15785 309 aaPredicted RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 ZIC1Q15915 447 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 ZNF684Q5T5D7 378 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 RPUSD3Q6P087 351 aaKnown RBP11.45□□□□□ -0.58
HERC6-202ENST00000273960 PRSS54Q6PEW0 395 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 DNM1P46Q6ZS02 220 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 PMM1Q92871 262 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 CNTD2Q9H8S5 307 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 FBRSQ9HAH7 460 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 HS3ST3B1Q9Y662 390 aa11.45□□□□□ -0.58
HERC6-202ENST00000273960 AHSA1O95433 338 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 HIST1H1BP16401 226 aaKnown RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 TUBG1P23258 451 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 ARRB1P49407 418 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 AFF3P51826 1226 aaKnown RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 RPL18Q07020 188 aaKnown RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 DLX2Q07687 328 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 CBLN3Q6UW01 205 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 ASB5Q8WWX0 329 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 ABHD14AQ9BUJ0 271 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 C19orf53Q9UNZ5 99 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 GPR34Q9UPC5 381 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 RP1P56715 2156 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 XKRYO14609 159 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 SLC2A1P11166 492 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 PCP4P48539 62 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 C1orf61Q13536 156 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 ARHGAP19Q14CB8 494 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 ZNF239Q16600 458 aaKnown RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 MESTQ5EB52 335 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 PRR22Q8IZ63 422 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 OR52N4Q8NGI2 321 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 NTNG2Q96CW9 530 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 KTI12Q96EK9 354 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 TCTN2Q96GX1 697 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 C5orf66Q9H5L9 145 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 EPHX3Q9H6B9 360 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 TUBA4BQ9H853 241 aa11.44□□□□□ -0.58
HERC6-202ENST00000273960 ELL3Q9HB65 397 aaPredicted RBP11.44□□□□□ -0.58
HERC6-202ENST00000273960 EPOPA6NHQ4 379 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms