RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 PSG4Q00888 419 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 HGFACQ04756 655 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 PMPCAQ10713 525 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 C3AR1Q16581 482 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 SNAI3Q3KNW1 292 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 SFRP5Q5T4F7 317 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 SKA3Q8IX90 412 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 GPX8Q8TED1 209 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 DEDD2Q8WXF8 326 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 WNT5BQ9H1J7 359 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 GHITMQ9H3K2 345 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 RANGRFQ9HD47 186 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-201ENST00000269318 SLC7A10Q9NS82 523 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 PARPBPQ9NWS1 579 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 TIMM10BQ9Y5J6 103 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 RPL36A-HNRNPH2H7BZ11 118 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 IGHV3-9P01782 118 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 MMP7P09237 267 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-201ENST00000269318 VSIG8P0DPA2 414 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 CCL11P51671 97 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 NKX2-5P52952 324 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-201ENST00000269318 STK11Q15831 433 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 MOGAT2Q3SYC2 334 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 SFRP4Q6FHJ7 346 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-201ENST00000269318 IGFL2Q6UWQ7 119 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 SLC16A14Q7RTX9 510 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 ZBTB8BQ8NAP8 495 aaPredicted RBP14.54□□□□□ -0.08
CCDC40-201ENST00000269318 OR52H1Q8NGJ2 320 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 AKR7LQ8NHP1 331 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 FYTTD1Q96QD9 318 aaKnown RBP14.54□□□□□ -0.08
CCDC40-201ENST00000269318 OR2H1Q9GZK4 316 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 DEFB127Q9H1M4 99 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 POU2F3Q9UKI9 436 aa14.54□□□□□ -0.08
CCDC40-201ENST00000269318 THBS4P35443 961 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 NOVA1P51513 510 aaKnown RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 PCBD1P61457 104 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 KCNJ8Q15842 424 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 RSPO4Q2I0M5 234 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 ANGPTL5Q86XS5 388 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 CCDC54Q8NEL0 328 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 OR56B4Q8NH76 319 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 SGK3Q96BR1 496 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 C1orf147Q96MC9 270 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 SPACA5Q96QH8 159 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 GAL3ST1Q99999 423 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 LRFN3Q9BTN0 628 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 C20orf85Q9H1P6 137 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 OR10A2Q9H208 303 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 EXO5Q9H790 373 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 CALHM2Q9HA72 323 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF224Q9NZL3 707 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 SPRR3Q9UBC9 169 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 WIPF3A6NGB9 483 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 TMEM14DPA8MWL7 114 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 RAB27BO00194 218 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 SULT1C2O00338 296 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 H2AFB2P0C5Z0 115 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 CPN1P15169 458 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 PSMB1P20618 241 aaKnown RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 HOXD11P31277 338 aaPredicted RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 SSBP1Q04837 148 aaKnown RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 RNPS1Q15287 305 aaKnown RBP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 PCGF3Q3KNV8 242 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 FAAP20Q6NZ36 180 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 CRIP3Q6Q6R5 217 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 ZNF627Q7L945 461 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 AKAP1Q92667 903 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCDC40-201ENST00000269318 ITFG2Q969R8 447 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 SEH1LQ96EE3 360 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 WDYHV1Q96HA8 205 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 BEX2Q9BXY8 128 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 ACTR6Q9GZN1 396 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 NEK6Q9HC98 313 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 MCUBQ9NWR8 336 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 DLL3Q9NYJ7 618 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 TAS2R8Q9NYW2 309 aa14.53□□□□□ -0.08
CCDC40-201ENST00000269318 TRGV5A0A0B4J1U4 118 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 OR6C65A6NJZ3 312 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 ALX3O95076 343 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 YES1P07947 543 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 CSF1P09603 554 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 PRF1P14222 555 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 SDHBP21912 280 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 CD83Q01151 205 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 CBX3Q13185 183 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 CAMK2BQ13554 666 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 GSG1Q2KHT4 349 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 AWAT2Q6E213 333 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 UTS2BQ765I0 119 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 PP6455Q8WZ26 134 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 C10orf35Q96D05 121 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 DMRTB1Q96MA1 342 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 PRRG4Q9BZD6 226 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 CHST5Q9GZS9 411 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 SCPEP1Q9HB40 452 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 ZNF407Q9C0G0 2248 aa14.52□□□□□ -0.09
CCDC40-201ENST00000269318 METTL21EPA6NDL7 271 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 MTRF1O75570 445 aaKnown RBP14.51□□□□□ -0.09
CCDC40-201ENST00000269318 LPLP06858 475 aa14.51□□□□□ -0.09
CCDC40-201ENST00000269318 HCKP08631 526 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms