RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 EDARQ9UNE0 448 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 GLAP06280 429 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 PATE4P0C8F1 98 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 ERGP11308 486 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 RPL35P42766 123 aaKnown RBP12.27□□□□□ -0.44
NPC1-201ENST00000269228 LYSMD2Q8IV50 215 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 CMTM4Q8IZR5 234 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 MAFIPQ8WZ33 124 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 SLC25A21Q9BQT8 299 aaPredicted RBP12.27□□□□□ -0.44
NPC1-201ENST00000269228 GLI4P10075 376 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 DGAT2L6Q6ZPD8 337 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 SLC38A9Q8NBW4 561 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 OR8D4Q8NGM9 314 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 CA5BP1Q8WTZ4 195 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 NMNAT2Q9BZQ4 307 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 FBXL2Q9UKC9 423 aa12.27□□□□□ -0.44
NPC1-201ENST00000269228 SPRY1O43609 319 aaPredicted RBP12.27□□□□□ -0.45
NPC1-201ENST00000269228 SPRY3O43610 288 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 TPT1P13693 172 aaKnown RBP12.27□□□□□ -0.45
NPC1-201ENST00000269228 SRPXP78539 464 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 ESCO2Q56NI9 601 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 PABPC1L2AQ5JQF8 200 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 ATG4DQ86TL0 474 aaPredicted RBP12.27□□□□□ -0.45
NPC1-201ENST00000269228 TM4SF19Q96DZ7 209 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 YIPF6Q96EC8 236 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 SEC22CQ9BRL7 303 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 FBXO7Q9Y3I1 522 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 DICER1Q9UPY3 1922 aaKnown RBP12.27□□□□□ -0.45
NPC1-201ENST00000269228 ANGPTL7O43827 346 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 CD79BP40259 229 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 HOXA1P49639 335 aaPredicted RBP12.27□□□□□ -0.45
NPC1-201ENST00000269228 ZNF721Q8TF20 911 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 OIT3Q8WWZ8 545 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 DERL3Q96Q80 235 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 C20orf85Q9H1P6 137 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 SCPEP1Q9HB40 452 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
NPC1-201ENST00000269228 K7EPK0 472 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 GNB3P16520 340 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 ETV6P41212 452 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 SHEQ5VZ18 495 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 FAM71E2Q8N5Q1 922 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 DYNC2LI1Q8TCX1 351 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 OCEL1Q9H607 264 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 RAB27BO00194 218 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 SDCBPO00560 298 aaPredicted RBP12.26□□□□□ -0.45
NPC1-201ENST00000269228 MSTNO14793 375 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 GPM6AP51674 278 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 IAH1Q2TAA2 248 aaPredicted RBP12.26□□□□□ -0.45
NPC1-201ENST00000269228 CD300LDQ6UXZ3 194 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 FAM185AQ8N0U4 392 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 NCOR1O75376 2440 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 A0A1W2PR77 199 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 FFAR1O14842 300 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 MPZL1O95297 269 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 CLDN1O95832 211 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 IFNA10P01566 189 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 IGHA2P01877 340 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 MGMTP16455 207 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 CSF2RBP32927 897 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 WDR38Q5JTN6 314 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 SUMF1Q8NBK3 374 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 CEP250Q9BV73 2442 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 FBXO24O75426 580 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 EIF4EP06730 217 aaKnown RBP12.26□□□□□ -0.45
NPC1-201ENST00000269228 GP1BAP07359 652 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 TMIGD3P0DMS9 266 aaPredicted RBP12.26□□□□□ -0.45
NPC1-201ENST00000269228 SLC25A35Q3KQZ1 300 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 OR2T2Q6IF00 324 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 OR2AE1Q8NHA4 323 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 TCTEX1D2Q8WW35 142 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 PELI1Q96FA3 418 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 ZNF416Q9BWM5 594 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 OTOFQ9HC10 1997 aa12.26□□□□□ -0.45
NPC1-201ENST00000269228 NXPH3O95157 252 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 EPPINO95925 133 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 PTBP1P26599 531 aaKnown RBP eCLIP12.25□□□□□ -0.45
NPC1-201ENST00000269228 EIF2S3P41091 472 aaKnown RBP12.25□□□□□ -0.45
NPC1-201ENST00000269228 SKP2Q13309 424 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 HNF4GQ14541 408 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 PDLIM3Q53GG5 364 aaPredicted RBP12.25□□□□□ -0.45
NPC1-201ENST00000269228 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 SLC23A1Q9UHI7 598 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 RIF1Q5UIP0 2472 aaKnown RBP12.25□□□□□ -0.45
NPC1-201ENST00000269228 A0A1W2PPV4 95 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 S100A2P29034 98 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 FUT6P51993 359 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 FCN2Q15485 313 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 ZNF767PQ75MW2 155 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 ADGRG3Q86Y34 549 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 FAM109AQ8N4B1 249 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 PLEKHF2Q9H8W4 249 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 QPCTLQ9NXS2 382 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 CACNA1IQ9P0X4 2223 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 LIPT2A6NK58 231 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 NUPL2O15504 423 aaKnown RBP12.25□□□□□ -0.45
NPC1-201ENST00000269228 ATF1P18846 271 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 ETFDHQ16134 617 aa12.25□□□□□ -0.45
NPC1-201ENST00000269228 CXorf67Q86X51 503 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms