RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ACHEP22303 614 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 NAAAQ02083 359 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 TNK1Q13470 666 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 YIF1BQ5BJH7 314 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 TMEM244Q5VVB8 128 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 FAM169BQ8N8A8 192 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR52H1Q8NGJ2 320 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR1J2Q8NGS2 313 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR13C3Q8NGS6 347 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 GPR148Q8TDV2 347 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 APOBEC3DQ96AK3 386 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 FGGYQ96C11 551 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 DERL3Q96Q80 235 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 PPP1R3EQ9H7J1 279 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 MOB1AQ9H8S9 216 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 CRIM1Q9NZV1 1036 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 FZR1Q9UM11 496 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 HHLA2Q9UM44 414 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 UBR5O95071 2799 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 A0A0U1RQV5 110 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 A0A1B0GVI7 797 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 ATP6V1G2-DDX39BF2Z307 99 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 ACKR3P25106 362 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 CD40P25942 277 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 CALRP27797 417 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 PCSK6P29122 969 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 UCP2P55851 309 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 CAV3P56539 151 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 FAM3AP98173 230 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 MXD1Q05195 221 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 BSPH1Q075Z2 132 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 GK2Q14410 553 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 TRAM1Q15629 374 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 Q499Y3 187 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 ASPHD2Q6ICH7 369 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR1J1Q8NGS3 322 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR14K1Q8NGZ2 314 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 TMEM106AQ96A25 262 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 ADAT3Q96EY9 351 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 RADILQ96JH8 1075 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 NKX3-1Q99801 234 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR2J1Q9GZK6 312 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 OR10A4Q9H209 315 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 NDUFA13Q9P0J0 144 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 EIF3KQ9UBQ5 218 aaKnown RBP8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 DHDHQ9UQ10 334 aa8.39□□□□□ -1.07
SNRNP40-201ENST00000263694 ABCA4P78363 2273 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 DOPEY1Q5JWR5 2465 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TRAV8-7A0A075B6U6 113 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TRBV5-7A0A0A0MS05 114 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 A0A1W2PPW3 197 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TUBAL3A6NHL2 446 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 SIAH2O43255 324 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 NOL3O60936 208 aaKnown RBP8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 NCR1O76036 304 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 CDRT1O95170 752 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 SERPINA3P01011 423 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 UCHL1P09936 223 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 PPP3CBP16298 524 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 FAHP16930 419 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 AGAP20933 346 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 CCL1P22362 96 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 FGF9P31371 208 aaPredicted RBP8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 SDC2P34741 201 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 MPV17P39210 176 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 SERPINB10P48595 397 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 GSK3AP49840 483 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 PPP1CBP62140 327 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 MSMPQ1L6U9 139 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 ALKBH6Q3KRA9 238 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TIMM50Q3ZCQ8 353 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TMEM255AQ5JRV8 349 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 DOK3Q7L591 496 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF420Q8TAQ5 688 aaPredicted RBP8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 SLC25A40Q8TBP6 338 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 CMBLQ96DG6 245 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 DCUN1D5Q9BTE7 237 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 FAM192AQ9GZU8 254 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TPK1Q9H3S4 243 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 SP140LQ9H930 580 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 ZNF275Q9NSD4 429 aaPredicted RBP8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TBCCD1Q9NVR7 557 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 TAS2R4Q9NYW5 299 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 PIGLQ9Y2B2 252 aa8.38□□□□□ -1.07
SNRNP40-201ENST00000263694 UTP20O75691 2785 aaKnown RBP8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 hCG_38984A0A1B0GV85 526 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 ABCD4O14678 606 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 XRCC2O43543 280 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 LILRA1O75019 489 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 CRYAAP02489 173 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 MAS1P04201 325 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 GNALP38405 381 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 RPS19P39019 145 aaKnown RBP8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 FABP6P51161 128 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 SORDQ00796 357 aa8.37□□□□□ -1.07
SNRNP40-201ENST00000263694 MALLQ13021 153 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms