RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 PRDX4Q13162 271 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 COL19A1Q14993 1142 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 RTL8BQ17RB0 113 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 GSG1Q2KHT4 349 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 S100A7AQ86SG5 101 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 ST8SIA1Q92185 356 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 FOXB1Q99853 325 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 ARPC3O15145 178 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 VAMP5O95183 116 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 GALNSP34059 522 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 DGCR2P98153 550 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 OR2AE1Q8NHA4 323 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 S1PR3Q99500 378 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 ADAT1Q9BUB4 502 aaKnown RBP10.96□□□□□ -0.65
SPG11-201ENST00000261866 POLDIP2Q9Y2S7 368 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 SPINK9Q5DT21 86 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 ZNF573Q86YE8 665 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 SIGLEC11Q96RL6 698 aa10.96□□□□□ -0.65
SPG11-201ENST00000261866 IGHV3-43A0A0B4J1X8 118 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 TRABD2BA6NFA1 517 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 IGHV3-43DP0DP04 118 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 RHOXF1Q8NHV9 184 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 CMBLQ96DG6 245 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 RHNO1Q9BSD3 238 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 TXNIPQ9H3M7 391 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 SLC6A13Q9NSD5 602 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 FLVCR2Q9UPI3 526 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 ST3GAL6Q9Y274 331 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 CEBPDP49716 269 aaPredicted RBP10.96□□□□□ -0.66
SPG11-201ENST00000261866 KMT5CQ86Y97 462 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 SLA2Q9H6Q3 261 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 LPAR2Q9HBW0 351 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 MTCH2Q9Y6C9 303 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 ALG1L2C9J202 215 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 PHYHD1Q5SRE7 291 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 CDC20BQ86Y33 519 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 NT5CQ8TCD5 201 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 FLVCR1Q9Y5Y0 555 aa10.96□□□□□ -0.66
SPG11-201ENST00000261866 GOSR1O95249 250 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 RPS27AP62979 156 aaKnown RBP10.95□□□□□ -0.66
SPG11-201ENST00000261866 UBA52P62987 128 aaKnown RBP10.95□□□□□ -0.66
SPG11-201ENST00000261866 LILRA6Q6PI73 481 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 FAM60AQ9NP50 221 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 CMC2Q9NRP2 79 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 LILRA5A6NI73 299 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 HAGHQ16775 308 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 C1orf87Q8N0U7 546 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 OLIG1Q8TAK6 271 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 TRAV17A0A0B4J275 112 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 DHHO43323 396 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 NME2P1O60361 137 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 FCGR2CP31995 323 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 PCK2Q16822 640 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 LYPD8Q6UX82 237 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 SFTPA2Q8IWL1 248 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 OR2L13Q8N349 312 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 SFT2D1Q8WV19 159 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 SLC35E1Q96K37 410 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 MSL2Q9HCI7 577 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 TRBV5-4A0A0C4DH59 114 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 GALNT16Q8N428 558 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 LINC00615Q96LM1 132 aaPredicted RBP10.95□□□□□ -0.66
SPG11-201ENST00000261866 OR2M2Q96R28 347 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 ZNF436Q9C0F3 470 aaPredicted RBP10.95□□□□□ -0.66
SPG11-201ENST00000261866 A0A087WUJ7 227 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 ARPC4-TTLL3A0A0A6YYG9 625 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 LRP5LA4QPB2 252 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 ATP1B1P05026 303 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 NXPH1P58417 271 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 CLVS2Q5SYC1 327 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 MVB12AQ96EY5 273 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 PRDM6Q9NQX0 595 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 OR2A25A4D2G3 310 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 UBL3O95164 117 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 TLE4Q04727 773 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 NXF2Q9GZY0 626 aaKnown RBP10.95□□□□□ -0.66
SPG11-201ENST00000261866 ZNF835Q9Y2P0 537 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 ADAMTSL1Q8N6G6 1762 aa10.95□□□□□ -0.66
SPG11-201ENST00000261866 GPR31O00270 319 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 UBE2G1P62253 170 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 RAE1P78406 368 aaKnown RBP10.94□□□□□ -0.66
SPG11-201ENST00000261866 TMEM41BQ5BJD5 291 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 OR52N1Q8NH53 320 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 ETV7Q9Y603 341 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 R4GMQ9 66 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 TTC3P53804 2025 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 NUDT19A8MXV4 375 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 SBK3P0C264 359 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 DTYMKP23919 212 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 HRH1P35367 487 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 FAM27D1Q5T7N8 215 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 COL13A1Q5TAT6 717 aaPredicted RBP10.94□□□□□ -0.66
SPG11-201ENST00000261866 STUMQ69YW2 141 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 Q6ZRG5 221 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 SLC30A7Q8NEW0 376 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 ISL2Q96A47 359 aa10.94□□□□□ -0.66
SPG11-201ENST00000261866 ASIC5Q9NY37 505 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms