RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 RAB6AP20340 208 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 KIR2DS2P43631 304 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF266Q14584 549 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 C3AR1Q16581 482 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 KIRREL2Q6UWL6 708 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 OR13D1Q8NGV5 346 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 SLC29A1Q99808 456 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 ARV1Q9H2C2 271 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 NTMQ9P121 344 aa12.19□□□□□ -0.46
PDGFRB-201ENST00000261799 OR4A8P0C604 315 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 CA6P23280 308 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 DRAM2Q6UX65 266 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 RASL11BQ9BPW5 248 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 PPIL3Q9H2H8 161 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 TUBB1Q9H4B7 451 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 NKX2-2O95096 273 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 RFX2P48378 723 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 OR2T35Q8NGX2 323 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 OIT3Q8WWZ8 545 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 KTI12Q96EK9 354 aaPredicted RBP12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 SPNS1Q9H2V7 528 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 RPS27AP62979 156 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 UBA52P62987 128 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 DHODHQ02127 395 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF529Q6P280 563 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 LYPD4Q6UWN0 246 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 EXTL1Q92935 676 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 SEH1LQ96EE3 360 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 MED30Q96HR3 178 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 RNF150Q9ULK6 438 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 ST3GAL6Q9Y274 331 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 ZFP92A6NM28 416 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 SMPD2O60906 423 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 LIFP15018 202 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 DUSP1P28562 367 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 PABPC1L2AQ5JQF8 200 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 TIPARPQ7Z3E1 657 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 FAM58AQ8N1B3 248 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 RASL10BQ96S79 203 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 SF3B5Q9BWJ5 86 aaKnown RBP12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 HEXA-AS1Q9H8Q6 139 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 PRR35P0CG20 571 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 GDNFP39905 211 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 MLF1P58340 268 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 TMEM217Q8N7C4 229 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 TMEM56Q96MV1 263 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
PDGFRB-201ENST00000261799 M0QYG6 137 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 UPK1BO75841 260 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 BEST4Q8NFU0 473 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 OR6S1Q8NH40 331 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 CCL19Q99731 98 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF2Q9BSG1 426 aaPredicted RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 MYH7BA7E2Y1 1941 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 DTYMKP23919 212 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 GPR6P46095 362 aaPredicted RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 CIB3Q96Q77 187 aaPredicted RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 PDGFBP01127 241 aaPredicted RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 HCCSP53701 268 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 TOMM34Q15785 309 aaPredicted RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 IGFBP7Q16270 282 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 CD276Q5ZPR3 534 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 LACC1Q8IV20 430 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 ALG14Q96F25 216 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 TTTY12Q9BZ98 90 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 IGLV3-16A0A075B6K0 115 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 ZC3H12DA2A288 527 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 T-ENOLP0DO92 83 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 APEX1P27695 318 aaKnown RBP12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 SPRED3Q2MJR0 410 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 HMGCLL1Q8TB92 370 aa12.17□□□□□ -0.46
PDGFRB-201ENST00000261799 SPRY1O43609 319 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 IGHV4-34P06331 123 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 RAC3P60763 192 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 BCDIN3DQ7Z5W3 292 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 DNAJC5GQ8N7S2 189 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 OR2B2Q9GZK3 357 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 TEX51A0A1B0GUA7 166 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 A0A1W2PQF6 199 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 MEIOCA2RUB1 952 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 PRR19A6NJB7 356 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 SULT1C2O00338 296 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 EML2O95834 649 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 SUMF1Q8NBK3 374 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 CEACAM1P13688 526 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 LGALS7P47929 136 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 LIN37Q96GY3 246 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 SCPEP1Q9HB40 452 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 GPATCH2Q9NW75 528 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 LIPGQ9Y5X9 500 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 TNS1Q9HBL0 1735 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 TRDV1A0A1B0GX56 115 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 F8W036 122 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 HAX1O00165 279 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 NKX2-8O15522 239 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 RAB5BP61020 215 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 FLI1Q01543 452 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms