RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PLCE1Q9P212 2302 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 LINC00854A0A1B0GVQ3 168 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 HLA-DQA2P01906 255 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 HMGN1P05114 100 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 CLEC2LP0C7M8 214 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 FGF9P31371 208 aaPredicted RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 PYCR1P32322 319 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 SERPINF1P36955 418 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 SLC25A1P53007 311 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 RPS25P62851 125 aaKnown RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 ADIPOQQ15848 244 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 MEP1BQ16820 701 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 LRRC75A-AS1Q8N1F1 130 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 PAQR4Q8N4S7 273 aaPredicted RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 ASCC1Q8N9N2 400 aaKnown RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 POM121L2Q96KW2 1035 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 TEX12Q9BXU0 123 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 ZNF701Q9NV72 531 aaPredicted RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 POLR1DQ9Y2S0 133 aa14.46□□□□□ -0.1
SDCBP-201ENST00000260130 SF3B6Q9Y3B4 125 aaKnown RBP14.46□□□□□ -0.1
SDCBP-201ENST00000260130 OR4A8P0C604 315 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 PAX1P15863 534 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 CCNOP22674 350 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 GLRXP35754 106 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 CDK10Q15131 360 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 OR2G6Q5TZ20 316 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 C11orf71Q6IPW1 123 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 OR10H5Q8NGA6 315 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 ZNRF4Q8WWF5 429 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 GATAD2BQ8WXI9 593 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 RFKQ969G6 155 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 COQ7Q99807 217 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 C11orf54Q9H0W9 315 aaPredicted RBP14.45□□□□□ -0.1
SDCBP-201ENST00000260130 MMP28Q9H239 520 aa14.45□□□□□ -0.1
SDCBP-201ENST00000260130 LOC100509620A0A075B734 347 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 SURF4O15260 269 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 SGCEO43556 437 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 GYPBP06028 91 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 SPI1P17947 270 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 MYL9P24844 172 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 GDI2P50395 445 aaKnown RBP14.44□□□□□ -0.1
SDCBP-201ENST00000260130 LCN1P1Q5VSP4 162 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 OR51L1Q8NGJ5 315 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 ENKURQ8TC29 256 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 GSX2Q9BZM3 304 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 MARCH7Q9H992 704 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 LHFPL6Q9Y693 200 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 MAP1AP78559 2803 aaPredicted RBP14.44□□□□□ -0.1
SDCBP-201ENST00000260130 TRDV1A0A1B0GX56 115 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 C5orf49A4QMS7 147 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 FAM183AA6NL82 134 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 COX5BP10606 129 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 CLUP10909 449 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 PAICSP22234 425 aaKnown RBP14.44□□□□□ -0.1
SDCBP-201ENST00000260130 CDKN1AP38936 164 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 SWI5Q1ZZU3 235 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 MST1LQ2TV78 715 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 CD200R1LQ6Q8B3 271 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 METAP1DQ6UB28 335 aaPredicted RBP14.44□□□□□ -0.1
SDCBP-201ENST00000260130 GJC3Q8NFK1 279 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 SLC7A6Q92536 515 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 PTP4A1Q93096 173 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 PERPQ96FX8 193 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 MRPL22Q9NWU5 206 aaKnown RBP14.44□□□□□ -0.1
SDCBP-201ENST00000260130 PLEK2Q9NYT0 353 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 VPS13CQ709C8 3753 aa14.44□□□□□ -0.1
SDCBP-201ENST00000260130 RER1O15258 196 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 DOK2O60496 412 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 ZNF823P16415 610 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 PTBP1P26599 531 aaKnown RBP eCLIP14.43□□□□□ -0.1
SDCBP-201ENST00000260130 PTH2RP49190 550 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 UCP2P55851 309 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 VASH1Q7L8A9 365 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-201ENST00000260130 OTULINQ96BN8 352 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 HCAR1Q9BXC0 346 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 MED20Q9H944 212 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 B9A039 149 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 PRR23D1E9PI22 279 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-201ENST00000260130 GPRIN2O60269 458 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 FAM157BP0CG42 384 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 PRR23D2P0DMB1 279 aaPredicted RBP14.43□□□□□ -0.1
SDCBP-201ENST00000260130 RAD52P43351 418 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 RPS23P62266 143 aaKnown RBP14.43□□□□□ -0.1
SDCBP-201ENST00000260130 HIST1H3AP68431 136 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 FABP5Q01469 135 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 EFNB3Q15768 340 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 C6orf183Q5T699 404 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 HIST2H3PS2Q5TEC6 136 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 HIST2H3AQ71DI3 136 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 C19orf18Q8NEA5 215 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 DMRTB1Q96MA1 342 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 CACNG6Q9BXT2 260 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 EIF3KQ9UBQ5 218 aaKnown RBP14.43□□□□□ -0.1
SDCBP-201ENST00000260130 CYB5R1Q9UHQ9 305 aa14.43□□□□□ -0.1
SDCBP-201ENST00000260130 TVP23AA6NH52 213 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 A8MV72 311 aaPredicted RBP14.42□□□□□ -0.1
SDCBP-201ENST00000260130 APOL3O95236 402 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 LIMS3P0CW19 117 aa14.42□□□□□ -0.1
SDCBP-201ENST00000260130 LIMS4P0CW20 117 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms