RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PHC2Q8IXK0 858 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 ZNF676Q8N7Q3 588 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 OR5L1Q8NGL2 311 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 OR10AC1Q8NH08 325 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 LILRB1Q8NHL6 650 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 TMEM171Q8WVE6 324 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 RGP1Q92546 391 aaPredicted RBP13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 CA10Q9NS85 328 aa13.59□□□□□ -0.23
CCDC90B-201ENST00000260054 A0A1W2PPR1 153 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 UBCP0CG48 685 aaKnown RBP13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 COX6B1P14854 86 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 THBS4P35443 961 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 MALLQ13021 153 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 TMEM255AQ5JRV8 349 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF704Q6ZNC4 412 aaPredicted RBP13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 COMMD2Q86X83 199 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 OR51A4Q8NGJ6 313 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 COMMD4Q9H0A8 199 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 RGCCQ9H4X1 137 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 FZR1Q9UM11 496 aa13.58□□□□□ -0.24
CCDC90B-201ENST00000260054 hCG_38984A0A1B0GV85 526 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 LOC107986453A0A1B0GWG9 222 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 FAM221AA4D161 298 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 E7EQL1 145 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 ISG15P05161 165 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 CD1AP06126 327 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 CCL1P22362 96 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 MPV17P39210 176 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 TNK1Q13470 666 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 GPR50Q13585 617 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 TMEM244Q5VVB8 128 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 RGS7BPQ6MZT1 257 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 FBXW12Q6X9E4 464 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 PGAP1Q75T13 922 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 C1orf174Q8IYL3 243 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 DRAXINQ8NBI3 349 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 OR13C5Q8NGS8 318 aa13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 KLF14Q8TD94 323 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 FAM71F1Q96KD3 344 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 REPIN1Q9BWE0 567 aaKnown RBP13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 PLEKHB1Q9UF11 243 aaPredicted RBP13.57□□□□□ -0.24
CCDC90B-201ENST00000260054 CCRL2O00421 344 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 TUBG1P23258 451 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ALDH3B2P48448 385 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 FABP6P51161 128 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 RPS23P62266 143 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 RPS25P62851 125 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 FAM3AP98173 230 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF672Q499Z4 452 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 MRPL21Q7Z2W9 205 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 PLPP7Q8NBV4 271 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 TMEM203Q969S6 136 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 TMIGD2Q96BF3 282 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 CMBLQ96DG6 245 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF442Q9H7R0 627 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 TUBG2Q9NRH3 451 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 NDUFB11Q9NX14 153 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF391Q9UJN7 358 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF281Q9Y2X9 895 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 SF3B6Q9Y3B4 125 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 HRNRQ86YZ3 2850 aaPredicted RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 DCHS2Q6V1P9 2916 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 SYT7O43581 403 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 GOSR1O95249 250 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ACHEP22303 614 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 TGFBR2P37173 567 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 MAGEB1P43366 347 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 PSG7Q13046 419 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF718Q3SXZ3 478 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 MBNL2Q5VZF2 373 aaKnown RBP13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 DOK3Q7L591 496 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 LRP11Q86VZ4 500 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 TMED9Q9BVK6 235 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 HHLA2Q9UM44 414 aa13.56□□□□□ -0.24
CCDC90B-201ENST00000260054 A0A1B0GVI7 797 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 LMX1BO60663 402 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 RAC2P15153 192 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 ZNF250P15622 560 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 CFL1P23528 166 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 ACKR3P25106 362 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 GSK3AP49840 483 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 INSL4Q14641 139 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 OR8B8Q15620 311 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 ADIPOQQ15848 244 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 ALKBH6Q3KRA9 238 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 YIF1BQ5BJH7 314 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 Q6ZSR3 168 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 OR13F1Q8NGS4 319 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 OR14K1Q8NGZ2 314 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 MRPL24Q96A35 216 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 HAVCR1Q96D42 359 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 MRPL37Q9BZE1 423 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 OPA3Q9H6K4 179 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 CISD1Q9NZ45 108 aaKnown RBP13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 V9GYS6 101 aa13.55□□□□□ -0.24
CCDC90B-201ENST00000260054 IGLV3-9A0A075B6K5 115 aa13.54□□□□□ -0.24
CCDC90B-201ENST00000260054 LOC390937A0A1W2PQ73 354 aa13.54□□□□□ -0.24
CCDC90B-201ENST00000260054 H3BSA7 217 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms