RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PCDH7O60245 1069 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 VENTXO95231 258 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 VIPP01282 170 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 OPRD1P41143 372 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 ACVR1Q04771 509 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 PLCXD2Q0VAA5 305 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 COA6Q5JTJ3 125 aaKnown RBP6.91□□□□□ -1.3
GPNMB-201ENST00000258733 FAM71E2Q8N5Q1 922 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 SLC16A11Q8NCK7 471 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM106AQ96A25 262 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 TRIB3Q96RU7 358 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 MICU1Q9BPX6 476 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 THYN1Q9P016 225 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 NAT8Q9UHE5 227 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 MYO10Q9HD67 2058 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 ANKRD66B4E2M5 251 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 PIRO00625 290 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 XRCC3O43542 346 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 FCMRO60667 390 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 FCGR3AP08637 254 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 PSMB1P20618 241 aaKnown RBP6.91□□□□□ -1.3
GPNMB-201ENST00000258733 SRD5A2P31213 254 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 PSEN2P49810 448 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 H3F3AP84243 136 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 SLC35G1Q2M3R5 365 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 CPZQ66K79 652 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 WDR74Q6RFH5 385 aaPredicted RBP6.91□□□□□ -1.3
GPNMB-201ENST00000258733 ABHD15Q6UXT9 468 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 Q6ZVU0 165 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 SLC25A26Q70HW3 274 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 DET1Q7L5Y6 550 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 GPR135Q8IZ08 494 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 SLC5A8Q8N695 610 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 B3GNT7Q8NFL0 401 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM134Q9H6X4 195 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 LPAR3Q9UBY5 353 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 IL36AQ9UHA7 158 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 FBXW11Q9UKB1 542 aa6.91□□□□□ -1.3
GPNMB-201ENST00000258733 CLDN11O75508 207 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 C4BPAP04003 597 aaKnown RBP6.9□□□□□ -1.3
GPNMB-201ENST00000258733 MPC1LP0DKB6 136 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 COL9A1P20849 921 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ADORA2BP29275 332 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 RBMS1P29558 406 aaKnown RBP6.9□□□□□ -1.3
GPNMB-201ENST00000258733 FOXA1P55317 472 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SPHARQ15513 63 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM128Q5BJH2 165 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SLC25A53Q5H9E4 307 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 MEPCEQ7L2J0 689 aaKnown RBP6.9□□□□□ -1.3
GPNMB-201ENST00000258733 CHST4Q8NCG5 386 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 THAP4Q8WY91 577 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 LRRC3Q9BY71 257 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 PPDPFQ9H3Y8 114 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 NMRAL1Q9HBL8 299 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 NECAP2Q9NVZ3 263 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 TAS2R5Q9NYW4 299 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 FIS1Q9Y3D6 152 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 PAM16Q9Y3D7 125 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 XRCC2O43543 280 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 TRAPPC6AO75865 159 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM225BP0DP42 221 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SRFP11831 508 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ST6GAL1P15907 406 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 CD27P26842 260 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 OR1D2P34982 312 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SNCAP37840 140 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 GABRA2P47869 451 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SRPXP78539 464 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 IRF9Q00978 393 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SLC6A3Q01959 620 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF154Q13106 437 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF266Q14584 549 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 CDCP2Q5VXM1 449 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 TMEM42Q69YG0 159 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ZNF343Q6P1L6 599 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 FRRS1Q6ZNA5 592 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 PRICKLE2Q7Z3G6 844 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 SAXO1Q8IYX7 474 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 MUC15Q8N387 334 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 CSNK1A1LQ8N752 337 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 NFKBIDQ8NI38 313 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 HMGB4Q8WW32 186 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ULBP2Q9BZM5 246 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 RERGLQ9H628 205 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 TAS2R8Q9NYW2 309 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 MEMO1Q9Y316 297 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 LTBP3Q9NS15 1303 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 COL4A1P02462 1669 aa6.9□□□□□ -1.3
GPNMB-201ENST00000258733 ODAMA1E959 279 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 B5MCH6 92 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 UMAD1C9J7I0 102 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 SLC17A3O00476 420 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 RFXANKO14593 260 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 ENTPD6O75354 484 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 TUSC2O75896 110 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 PROSCO94903 275 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 WNT1P04628 370 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 IL5P05113 134 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 FAM157CP0CG43 387 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms