RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 MRGPRX4Q96LA9 322 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF488Q96MN9 340 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 KCNK17Q96T54 332 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 RAB33BQ9H082 229 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 OR2S2Q9NQN1 319 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 ZNF224Q9NZL3 707 aa8.02□□□□□ -1.12
CKAP2-201ENST00000258607 MRPS28Q9Y2Q9 187 aaKnown RBP8.02□□□□□ -1.12
CKAP2-201ENST00000258607 CUBNO60494 3623 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 C5orf49A4QMS7 147 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 M0R135 149 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 NPIPB7O75200 414 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 MRPL33O75394 65 aaKnown RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 CSTBP04080 98 aaKnown RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 TFF1P04155 84 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 RAB3AP20336 220 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 BLVRBP30043 206 aaPredicted RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 BDKRB2P30411 391 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 BTCP35070 178 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 RIN1Q13671 783 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 TRIP6Q15654 476 aaKnown RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 FAM74A1Q5RGS3 127 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ZNF385CQ66K41 422 aaPredicted RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 FJX1Q86VR8 437 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ZNF799Q96GE5 643 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 UTP23Q9BRU9 249 aaKnown RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 BCL2L14Q9BZR8 327 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 EXOSC3Q9NQT5 275 aaKnown RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ABRACLQ9P1F3 81 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 NOSIPQ9Y314 301 aaKnown RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 LIPGQ9Y5X9 500 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 R4GMQ9 66 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ZNF736B4DX44 427 aaPredicted RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 CDX4O14627 284 aaPredicted RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 LYZL6O75951 148 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 HOXB5P09067 269 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 LIFP15018 202 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 SLC6A1P30531 599 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 CDC20Q12834 499 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 HIKESHIQ53FT3 197 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 TSPO2Q5TGU0 170 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 DCAF12L2Q5VW00 463 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 STEAP1BQ6NZ63 245 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 OR9K2Q8NGE7 335 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 STK35Q8TDR2 534 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ST7LQ8TDW4 575 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 RNF166Q96A37 237 aaPredicted RBP8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ARHGAP5-AS1Q96IT6 56 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 ARL6Q9H0F7 186 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 TREM2Q9NZC2 230 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 CCDC168Q8NDH2 2452 aa8.02□□□□□ -1.13
CKAP2-201ENST00000258607 OR6C76A6NM76 312 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 DHHO43323 396 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 RAD51DO75771 328 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 OR7C1O76099 320 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-201ENST00000258607 HLA-AP01891 365 aaKnown RBP8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SFTPBP07988 381 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 OR3A3P47888 321 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 OR3A2P47893 321 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 AKR1C2P52895 323 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SLC25A1P53007 311 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 PER3P56645 1201 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 AKR1C1Q04828 323 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 RNASE10Q5GAN6 216 aaKnown RBP8.01□□□□□ -1.13
CKAP2-201ENST00000258607 EXD3Q8N9H8 876 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 RELL2Q8NC24 303 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SMIM4Q8WVI0 70 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 ADAMTS14Q8WXS8 1223 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 POFUT1Q9H488 388 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 TMEM9BQ9NQ34 198 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 NPAP1Q9NZP6 1156 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 USP9YO00507 2555 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-201ENST00000258607 A6NIZ1 184 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SGCEO43556 437 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SLC22A5O76082 557 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 ANXA3P12429 323 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 RAP1BP61224 184 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 RAP1AP62834 184 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 LTC4SQ16873 150 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SP6Q3SY56 376 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 P4HA3Q7Z4N8 544 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 WDR5BQ86VZ2 330 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 MISPQ8IVT2 679 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SULF2Q8IWU5 870 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 OR5D14Q8NGL3 314 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 MARCH1Q8TCQ1 289 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 ELP5Q8TE02 316 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 FBXO17Q96EF6 278 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 PCED1AQ9H1Q7 454 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 ISYNA1Q9NPH2 558 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 ZNF71Q9NQZ8 489 aaPredicted RBP8.01□□□□□ -1.13
CKAP2-201ENST00000258607 LOC100289279A0A1B0GTE1 492 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 ACOT7O00154 380 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 PGA4P0DJD7 388 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 PGA3P0DJD8 388 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 MAP2K6P52564 334 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 MLF1P58340 268 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 S100A10P60903 97 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 SLC35A1P78382 337 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 TRAM1Q15629 374 aa8.01□□□□□ -1.13
CKAP2-201ENST00000258607 MOB3CQ70IA8 216 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms