RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CSRP2Q16527 193 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 PHYHD1Q5SRE7 291 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 CLVS2Q5SYC1 327 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 PPP1R32Q7Z5V6 425 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 RTN4RL2Q86UN3 420 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 OR52N4Q8NGI2 321 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 OR51S1Q8NGJ8 323 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF845Q96IR2 970 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 ZNF416Q9BWM5 594 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 GPN1Q9HCN4 374 aaPredicted RBP12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 R4GMQ9 66 aa12.96□□□□□ -0.33
TRAFD1-201ENST00000257604 ROS1P08922 2347 aa12.96□□□□□ -0.34
TRAFD1-201ENST00000257604 ANKRD20A5PA0PJZ0 165 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 TRAF3IP2O43734 574 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 HCKP08631 526 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF20P17024 532 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 HTR2CP28335 458 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 AP3S2P59780 193 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 GABREP78334 506 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 TMEM164Q5U3C3 297 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 VASH2Q86V25 355 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 MUC20Q8N307 709 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 BVESQ8NE79 360 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ST7LQ8TDW4 575 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ADAT3Q96EY9 351 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 EDEM2Q9BV94 578 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 PBOV1Q9GZY1 135 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 BANF2Q9H503 90 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 IFT46Q9NQC8 304 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 PLEK2Q9NYT0 353 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 LRFN1Q9P244 771 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 OPN4Q9UHM6 478 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 TMEM235A6NFC5 223 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF208O43345 1280 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 TNFSF15O95150 251 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ECDO95905 644 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 GABRA1P14867 456 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 C4BPBP20851 252 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF121P58317 390 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 GLT8D1Q68CQ7 371 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 CD163Q86VB7 1156 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 LINC00469Q8N7U9 141 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 NOXO1Q8NFA2 376 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 OR1S1Q8NH92 325 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 MIB2Q96AX9 1013 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ZC3H10Q96K80 434 aaKnown RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 SLC26A1Q9H2B4 701 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 WDR54Q9H977 334 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 LINC01387J3KSC0 135 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 CTDSPLO15194 276 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 RBBP9O75884 186 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 CELA3AP09093 270 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 OR4C16Q8NGL9 310 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 SCARB1Q8WTV0 552 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF75AQ96N20 296 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 GPR84Q9NQS5 396 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 LHFPL6Q9Y693 200 aa12.95□□□□□ -0.34
TRAFD1-201ENST00000257604 TRBV5-5A0A0J9YX44 114 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 UBE2QL1A1L167 161 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 C9orf172C9J069 976 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 ZIC3O60481 467 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 LIFP15018 202 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 CYB561P49447 251 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 GK2Q14410 553 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 PDZD9Q8IXQ8 264 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 OR4S1Q8NGB4 309 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 OR4D6Q8NGJ1 314 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 OR10S1Q8NGN2 331 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 OR10K1Q8NGX5 313 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 ULBP2Q9BZM5 246 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF319Q9P2F9 582 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 TMEM272A0A1B0GTI8 110 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 A0A1W2PP11 408 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 A8MXK9 166 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 NDUFB6O95139 128 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 SUMO3P55854 103 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 ZNF660Q6AZW8 331 aaPredicted RBP12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 BIVMQ86UB2 503 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 POTEKPQ9BYX7 375 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 MFFQ9GZY8 342 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 ZCCHC4Q9H5U6 513 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 DEPPQ9NTK1 212 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 CYB5R1Q9UHQ9 305 aa12.94□□□□□ -0.34
TRAFD1-201ENST00000257604 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 KRBOX1C9JBD0 128 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 PGA4P0DJD7 388 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 PGA3P0DJD8 388 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 B4GALT1P15291 398 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 CARD18P57730 90 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 SLC35A1P78382 337 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 C5orf46Q6UWT4 87 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
TRAFD1-201ENST00000257604 TFAP2EQ6VUC0 442 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms