RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 I3L1I5 382 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 FAM27D1Q5T7N8 215 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 PRAMEF5Q5TYX0 476 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 PRAMEF6Q5VXH4 476 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 CYHR1Q6ZMK1 362 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 FBXO4Q9UKT5 387 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF732B4DXR9 585 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 MFNGO00587 321 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 CSN1S1P47710 185 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 ELAVL1Q15717 326 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 LGALSLQ3ZCW2 172 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 PLXDC2Q6UX71 529 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 MRPL43Q8N983 215 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 FOXJ1Q92949 421 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 TCTN2Q96GX1 697 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 THOC3Q96J01 351 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 SH3BGRL2Q9UJC5 107 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 PAM16Q9Y3D7 125 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZC3H12DA2A288 527 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 MAP1LC3B2A6NCE7 125 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 DSCR3O14972 297 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 CST7O76096 145 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR5AL1P0C617 328 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 BSXQ3C1V8 233 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMEM65Q6PI78 240 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMEM64Q6YI46 380 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMEM251Q8N6I4 163 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 NUBPLQ8TB37 319 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 SMIM14Q96QK8 99 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 MS4A8Q9BY19 250 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 MAP1LC3BQ9GZQ8 125 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 ADAMTS7Q9UKP4 1686 aa11.95□□□□□ -0.5
PCDHGA3-201ENST00000253812 FBP1P09467 338 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 DAOP14920 347 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 CNN1P51911 297 aaKnown RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 LEMD1Q68G75 181 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SH2D5Q6ZV89 423 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 RCL1Q9Y2P8 373 aaKnown RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 BRWD1Q9NSI6 2320 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 RBFOX3A6NFN3 312 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 FIGNL2A6NMB9 653 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR52A4PA6NMU1 304 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC17A2O00624 439 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 RRP8O43159 456 aaKnown RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 GLSO94925 669 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC25A6P12236 298 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SDHBP21912 280 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 CD96P40200 585 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 HHEXQ03014 270 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SEZ6L2Q6UXD5 910 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 LSRQ86X29 649 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 OLIG1Q8TAK6 271 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 TM4SF18Q96CE8 201 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 NMES1Q9C002 83 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 FAM234AQ9H0X4 552 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 MASP2O00187 686 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC2A10O95528 541 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 MFSD12Q6NUT3 480 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 NHLRC1Q6VVB1 395 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 ARHGEF39Q8N4T4 335 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SMIM12Q96EX1 92 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 IKZF5Q9H5V7 419 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 OBP2BQ9NPH6 170 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC5A6Q9Y289 635 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 A0A1B0GV72 72 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 RAB29O14966 203 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 IGFBP6P24592 240 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 RGRP47804 291 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SUB1P53999 127 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 EGR3Q06889 387 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 LTC4SQ16873 150 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF628Q5EBL2 1059 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 FAM26DQ5JW98 314 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 RTN4RL1Q86UN2 441 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 GPR160Q9UJ42 338 aa11.94□□□□□ -0.5
PCDHGA3-201ENST00000253812 SPINT2O43291 252 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 ZNF253O75346 499 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR2J2O76002 312 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 MT-ATP6P00846 226 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 CEBPBP17676 345 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 ATF1P18846 271 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 PPIAP62937 165 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 CST6Q15828 149 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 HLA-BQ31612 363 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 HSD11B1LQ7Z5J1 315 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR52E1Q8NGJ3 308 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 OR51F2Q8NH61 342 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 ISG20Q96AZ6 181 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 ATG101Q9BSB4 218 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 JAM3Q9BX67 310 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 SLC17A5Q9NRA2 495 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 CACFD1Q9UGQ2 172 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 TMEM184BQ9Y519 407 aaPredicted RBP11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 CEP290O15078 2479 aa11.93□□□□□ -0.5
PCDHGA3-201ENST00000253812 NINQ8N4C6 2090 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms