RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 IGKV6D-21A0A0A0MT36 114 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 CHRNA7P36544 502 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 EGR3Q06889 387 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 FAM27D1Q5T7N8 215 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 TRNP1Q6NT89 227 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 RFLNAQ6ZTI6 216 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 PACRGQ96M98 296 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 ISG20L2Q9H9L3 353 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 HMGN4O00479 90 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 PLPP1O14494 284 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 NPPBP16860 134 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 OTUD1Q5VV17 481 aaPredicted RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 ACSM6Q6P461 480 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 TOE1Q96GM8 510 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 LRFN3Q9BTN0 628 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 IGHV3-9P01782 118 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 SLC6A1P30531 599 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 CDKN3Q16667 212 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 EMC4Q5J8M3 183 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 LHFPL2Q6ZUX7 228 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 SIGLEC11Q96RL6 698 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 WDR61Q9GZS3 305 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 SLIRPQ9GZT3 109 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 IL21Q9HBE4 155 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF346Q9UL40 294 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 GPR37O15354 613 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 HOXC13P31276 330 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 RFC3P40938 356 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 ASCL1P50553 236 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 OR8G1Q15617 311 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 LAIR1Q6GTX8 287 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 OR52N4Q8NGI2 321 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 UTP23Q9BRU9 249 aaKnown RBP12.57□□□□□ -0.4
TARDBP-201ENST00000240185 SLC25A37Q9NYZ2 338 aa12.57□□□□□ -0.4
TARDBP-201ENST00000240185 MYH3P11055 1940 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TCRBV5S2A0A599 114 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TCF21O43680 179 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 SOX15O60248 233 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 EIF4E2O60573 245 aaKnown RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 WDR73Q6P4I2 378 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 BCL2L2Q92843 193 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 CYSLTR2Q9NS75 346 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 DHCR7Q9UBM7 475 aaKnown RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 M0R135 149 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 B3GALT4O96024 378 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ST3GAL2Q16842 350 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM179BQ7Z7N9 219 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF799Q96GE5 643 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 NRSN2Q9GZP1 204 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 SLC25A19Q9HC21 320 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 HCFC1R1Q9NWW0 138 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 NDUFB6O95139 128 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 NRASP01111 189 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 SEMG1P04279 462 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 DRD1P21728 446 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TBXA2RP21731 343 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 BMP5P22003 454 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 HTR1DP28221 377 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ELOBQ15370 118 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TUSC1Q2TAM9 212 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TMPRSS11FQ6ZWK6 438 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ETFBKMTQ8IXQ9 262 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ARRDC1Q8N5I2 433 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 ANKLE1Q8NAG6 615 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM230Q96A57 120 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 LINC00052Q96N35 136 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 SDF2Q99470 211 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 FAAP24Q9BTP7 215 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 MBTPS2O43462 519 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 BCL6P41182 706 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 PXNP49023 591 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 TRMT12Q53H54 448 aaKnown RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 LRP11Q86VZ4 500 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 OR10X1Q8NGY0 326 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 CSNK1G1Q9HCP0 422 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 FGF20Q9NP95 211 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-201ENST00000240185 USP3Q9Y6I4 520 aa12.56□□□□□ -0.4
TARDBP-201ENST00000240185 NEURL1O76050 574 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 DUS4LO95620 317 aaKnown RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 EPHA2P29317 976 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 TNFRSF4P43489 277 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 MYPOPQ86VE0 399 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 RIMKLAQ8IXN7 391 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 SLC25A43Q8WUT9 341 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM191AQ9H0A3 160 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 EPHX3Q9H6B9 360 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF552Q9H707 407 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 TRAV1-2A0A0B4J238 106 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ARG1P05089 322 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ZBTB25P24278 435 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 CCSMST1Q4G0I0 132 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 FAM78BQ5VT40 261 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms