RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DMRTB1Q96MA1 342 aa20.4■□□□□ 0.86
MSX2-201ENST00000239243 PRRG4Q9BZD6 226 aa20.4■□□□□ 0.86
MSX2-201ENST00000239243 STOMP27105 288 aa20.39■□□□□ 0.86
MSX2-201ENST00000239243 GSG1Q2KHT4 349 aa20.39■□□□□ 0.86
MSX2-201ENST00000239243 ZNF766Q5HY98 468 aa20.39■□□□□ 0.86
MSX2-201ENST00000239243 SLC16A14Q7RTX9 510 aa20.39■□□□□ 0.86
MSX2-201ENST00000239243 ZNF486Q96H40 463 aaPredicted RBP20.39■□□□□ 0.86
MSX2-201ENST00000239243 FYTTD1Q96QD9 318 aaKnown RBP20.39■□□□□ 0.86
MSX2-201ENST00000239243 HCKP08631 526 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 ZNF32P17041 273 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 FAM189A2Q15884 450 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 OR2W3Q7Z3T1 314 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 ANGPTL5Q86XS5 388 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 LYZL4Q96KX0 146 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 BEX2Q9BXY8 128 aa20.39■□□□□ 0.85
MSX2-201ENST00000239243 ZNF724A8MTY0 619 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 E9PLN8 166 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 ALX3O95076 343 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 ANOS1P23352 680 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 MAB21L1Q13394 359 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 RNPS1Q15287 305 aaKnown RBP20.38■□□□□ 0.85
MSX2-201ENST00000239243 TMEM255AQ5JRV8 349 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 CD276Q5ZPR3 534 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 OR10K2Q6IF99 312 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.38■□□□□ 0.85
MSX2-201ENST00000239243 PRSS33Q8NF86 280 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 GIMAP1Q8WWP7 306 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 NUDT16L1Q9BRJ7 211 aaKnown RBP20.38■□□□□ 0.85
MSX2-201ENST00000239243 OR51J1Q9H342 316 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 ZNF552Q9H707 407 aaPredicted RBP20.38■□□□□ 0.85
MSX2-201ENST00000239243 DHRS7CA6NNS2 312 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 DBHP09172 617 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 AKAIN1P0CW23 69 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 GSK3AP49840 483 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 QRFPP83859 136 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 CHMP1BQ7LBR1 199 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 VASH2Q86V25 355 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 EXO5Q9H790 373 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 BCO1Q9HAY6 547 aa20.38■□□□□ 0.85
MSX2-201ENST00000239243 OR6C6A6NF89 314 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 YES1P07947 543 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 UBBP0CG47 229 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 VSIG8P0DPA2 414 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 GUCA2AQ02747 115 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 TSPO2Q5TGU0 170 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 ZNF774Q6NX45 483 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 UTS2BQ765I0 119 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 FGD2Q7Z6J4 655 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 NOXA1Q86UR1 476 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 PNLDC1Q8NA58 520 aaKnown RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 ITFG2Q969R8 447 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 TP63Q9H3D4 680 aaPredicted RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 NKIRAS2Q9NYR9 191 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 MYEF2Q9P2K5 600 aaKnown RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 ZNF107Q9UII5 783 aaPredicted RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 ZNF391Q9UJN7 358 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 MRPS28Q9Y2Q9 187 aaKnown RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 GTF2F2P13984 249 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 MRPS15P82914 257 aaKnown RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 UNC119Q13432 240 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 ZNF101Q8IZC7 436 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 PAQR4Q8N4S7 273 aaPredicted RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 SEH1LQ96EE3 360 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 GAL3ST1Q99999 423 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 TRAF4Q9BUZ4 470 aaPredicted RBP20.37■□□□□ 0.85
MSX2-201ENST00000239243 OR2H1Q9GZK4 316 aa20.37■□□□□ 0.85
MSX2-201ENST00000239243 TMEM14DPA8MWL7 114 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 RPL36A-HNRNPH2H7BZ11 118 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 NDUFB6O95139 128 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 PRF1P14222 555 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 RCVRNP35243 200 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 HTR5AP47898 357 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 TAS2R19P59542 299 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 FNDC9Q8TBE3 224 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 GPER1Q99527 375 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 CHST5Q9GZS9 411 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 LDAHQ9H6V9 325 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 NOX3Q9HBY0 568 aa20.36■□□□□ 0.85
MSX2-201ENST00000239243 NKX2-8O15522 239 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 PSG4Q00888 419 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 KRTAP27-1Q3LI81 207 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 TUSC5Q8IXB3 177 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 ACBD4Q8NC06 268 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 OR4C16Q8NGL9 310 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 KCNG3Q8TAE7 436 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 GHRLQ9UBU3 117 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 C5orf63A6NC05 138 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 RAB27BO00194 218 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 ITGB2P05107 769 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 CHRM2P08172 466 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 HOXD11P31277 338 aaPredicted RBP20.35■□□□□ 0.85
MSX2-201ENST00000239243 TNFSF10P50591 281 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 RBMS2Q15434 407 aaKnown RBP20.35■□□□□ 0.85
MSX2-201ENST00000239243 LINC00303Q3SY05 128 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 GLIPR1L1Q6UWM5 242 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.35■□□□□ 0.85
MSX2-201ENST00000239243 MCEMP1Q8IX19 187 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 SSC4DQ8WTU2 575 aa20.35■□□□□ 0.85
MSX2-201ENST00000239243 DACT3Q96B18 629 aaPredicted RBP20.35■□□□□ 0.85
MSX2-201ENST00000239243 PIGLQ9Y2B2 252 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms