RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 CHRM2P08172 466 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 RABIFP47224 123 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 RAB5BP61020 215 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 IL15RAQ13261 267 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 TDGQ13569 410 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 EBPQ15125 230 aaKnown RBP13.77□□□□□ -0.21
DDX55-201ENST00000238146 MS4A18Q3C1V0 323 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 ETV3LQ6ZN32 361 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 GRINAQ7Z429 371 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 ZNF248Q8NDW4 579 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 NANPQ8TBE9 248 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 PHOSPHO2Q8TCD6 241 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 GPR119Q8TDV5 335 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 ASB10Q8WXI3 467 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 PBOV1Q9GZY1 135 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 IGFLR1Q9H665 355 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 H0YIG0 161 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 AGPAT2O15120 278 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 CTSEP14091 401 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 RCC1P18754 421 aaPredicted RBP13.77□□□□□ -0.21
DDX55-201ENST00000238146 NME2P22392 152 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 ABCD3P28288 659 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 CD80P33681 288 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 VEGFBP49765 207 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 ECH1Q13011 328 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 DNM1P34Q6PK57 102 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 C9orf40Q8IXQ3 194 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 METTL8Q9H825 291 aaKnown RBP13.77□□□□□ -0.21
DDX55-201ENST00000238146 TAF9BQ9HBM6 251 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 SMCO4Q9NRQ5 59 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 DNAJB11Q9UBS4 358 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 TMEM131Q92545 1883 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 A6NIZ1 184 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 TMEM150CB9EJG8 249 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 RAD51DO75771 328 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 MPIG6BO95866 241 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 GSTP1P09211 210 aaKnown RBP13.76□□□□□ -0.21
DDX55-201ENST00000238146 BCKDHBP21953 392 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 F2RL1P55085 397 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 TMEM50BP56557 158 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 RAP1BP61224 184 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 RAP1AP62834 184 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 PLCXD2Q0VAA5 305 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 GLIPR1L1Q6UWM5 242 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 DHRS11Q6UWP2 260 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 BTNL8Q6UX41 500 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 PEG10Q86TG7 708 aaKnown RBP13.76□□□□□ -0.21
DDX55-201ENST00000238146 POC1AQ8NBT0 407 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 SLAMF6Q96DU3 332 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 RAB3CQ96E17 227 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 TMEM41AQ96HV5 264 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 C2orf50Q96LR7 162 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 C1orf147Q96MC9 270 aaPredicted RBP13.76□□□□□ -0.21
DDX55-201ENST00000238146 RP1P56715 2156 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 LINC00587B1AMM8 73 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 FAM157AC9JC47 383 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 PRAMEF26H0Y7S4 382 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 HIST1H1DP16402 221 aaKnown RBP13.76□□□□□ -0.21
DDX55-201ENST00000238146 FPR2P25090 351 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 OR1D4P47884 311 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 FOXK1P85037 733 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 TMEM92Q6UXU6 159 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 NAA40Q86UY6 237 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 CLCC1Q96S66 551 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 PLA2G2EQ9NZK7 142 aa13.76□□□□□ -0.21
DDX55-201ENST00000238146 NPIPA5E9PKD4 350 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 MFNGO00587 321 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 ZNF354AO60765 605 aaPredicted RBP13.75□□□□□ -0.21
DDX55-201ENST00000238146 FBXO24O75426 580 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 CA3P07451 260 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 PTAFRP25105 342 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 PAX6P26367 422 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 SULT1A2P50226 295 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 FZD2Q14332 565 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 ACTBL2Q562R1 376 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 FAM76BQ5HYJ3 339 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 EIF5AL1Q6IS14 154 aaKnown RBP13.75□□□□□ -0.21
DDX55-201ENST00000238146 RBMS3Q6XE24 437 aaKnown RBP13.75□□□□□ -0.21
DDX55-201ENST00000238146 SLC16A13Q7RTY0 426 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.75□□□□□ -0.21
DDX55-201ENST00000238146 C14orf79Q96F83 325 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 SULT4A1Q9BR01 284 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 BANF2Q9H503 90 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 MED29Q9NX70 200 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 GSKIPQ9P0R6 139 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 NPIPA1Q9UND3 350 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 GON4LQ3T8J9 2241 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 ARID1AO14497 2285 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 IGKV3D-11A0A0A0MRZ8 115 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 SPTY2D1-AS1A0A0U1RR47 76 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 C5orf52A6NGY3 159 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 ID4P47928 161 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 EFNA3P52797 238 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 S100A10P60903 97 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 DCAF7P61962 342 aa13.75□□□□□ -0.21
DDX55-201ENST00000238146 EIF5AP63241 154 aaKnown RBP13.75□□□□□ -0.21
DDX55-201ENST00000238146 AKIRIN2Q53H80 203 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms