RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 MYOGP15173 224 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 PTGFRP43088 359 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 C21orf58P58505 322 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ELAVL1Q15717 326 aaKnown RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ZNF321PQ8N8H1 164 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 CMBLQ96DG6 245 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 XKRY2A2RUG3 117 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 PRSS37A4D1T9 235 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ACTL6BO94805 426 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 CST2P09228 141 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 RBP2P50120 134 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 GZMMP51124 257 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 UBE2NP61088 152 aaKnown RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 DMBX1Q8NFW5 382 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 OR4D9Q8NGE8 314 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 CCDC74AQ96AQ1 378 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 BSCL2Q96G97 398 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 OR5K3A6NET4 321 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 FGF17O60258 216 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 PRAMEF4O60810 478 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 HNRNPA3P51991 378 aaKnown RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 KRTDAPP60985 99 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 PKIAP61925 76 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 MRPL58Q14197 206 aaKnown RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 SLC16A14Q7RTX9 510 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 GRINAQ7Z429 371 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ARHGEF39Q8N4T4 335 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 C19orf47Q8N9M1 422 aaKnown RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 OR51H1Q8NH63 302 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 IGHA1P01876 353 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 SEMG1P04279 462 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 FAM74A3Q4VXF1 159 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
HCFC2-201ENST00000229330 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 CA10Q9NS85 328 aa12.48□□□□□ -0.41
HCFC2-201ENST00000229330 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 H0Y8G0 127 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 TBX19O60806 448 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 EMDP50402 254 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 C17orf67Q0P5P2 114 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 GJC3Q8NFK1 279 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 MAGT1Q9H0U3 335 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 LRIT1Q9P2V4 623 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 GHRLQ9UBU3 117 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 ANGPTL7O43827 346 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 OPRM1P35372 400 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 TIAL1Q01085 375 aaKnown RBP eCLIP12.47□□□□□ -0.41
HCFC2-201ENST00000229330 SRYQ05066 204 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 PCK2Q16822 640 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 LHX8Q68G74 356 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 PWWP2BQ6NUJ5 590 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 STRADBQ9C0K7 418 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 SLC35D1Q9NTN3 355 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 LPAR3Q9UBY5 353 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 A0A0A6YYD5 115 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 FFAR1O14842 300 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 DAOP14920 347 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 ECH1Q13011 328 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 RPL7L1Q6DKI1 246 aaKnown RBP12.47□□□□□ -0.41
HCFC2-201ENST00000229330 BCORP1Q8N888 145 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 KCNJ15Q99712 375 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 KIR3DX1Q9H7L2 352 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 HAO2Q9NYQ3 351 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 TRBV11-1A0A0K0K1C0 115 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 HIST1H3AP68431 136 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 ACAD8Q9UKU7 415 aa12.47□□□□□ -0.41
HCFC2-201ENST00000229330 VSTM5A8MXK1 200 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 KIRREL2Q6UWL6 708 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 RLN3Q8WXF3 142 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 C20orf141Q9NUB4 165 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 CD81P60033 236 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 HDAC8Q9BY41 377 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 PBOV1Q9GZY1 135 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 HIPK2Q9H2X6 1198 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 GPR84Q9NQS5 396 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 ZFC3H1O60293 1989 aaKnown RBP12.46□□□□□ -0.41
HCFC2-201ENST00000229330 KCNAB1Q14722 419 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 SPANXN5Q5MJ07 72 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 TFAP2EQ6VUC0 442 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 TMEM91Q6ZNR0 172 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 WBP2Q969T9 261 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 PACRGQ96M98 296 aaPredicted RBP12.46□□□□□ -0.41
HCFC2-201ENST00000229330 OR8B4Q96RC9 309 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 LYRM2Q9NU23 88 aaPredicted RBP12.46□□□□□ -0.41
HCFC2-201ENST00000229330 FBXL17Q9UF56 701 aa12.46□□□□□ -0.41
HCFC2-201ENST00000229330 LSM2Q9Y333 95 aaKnown RBP12.46□□□□□ -0.41
HCFC2-201ENST00000229330 TOX4O94842 621 aa12.46□□□□□ -0.42
HCFC2-201ENST00000229330 CFDP00746 253 aaPredicted RBP12.46□□□□□ -0.42
HCFC2-201ENST00000229330 GP1BAP07359 652 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms