RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 PRF1P14222 555 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 GUCA1AP43080 201 aaPredicted RBP16.81■□□□□ 0.28
YBX3-201ENST00000228251 STARP49675 285 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 ZNF84P51523 738 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 GPR137CQ8N3F9 429 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 GALNT16Q8N428 558 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 FAM46BQ96A09 425 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 DACT3Q96B18 629 aaPredicted RBP16.81■□□□□ 0.28
YBX3-201ENST00000228251 OR2A7Q96R45 310 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 ZNF224Q9NZL3 707 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 LRFN1Q9P244 771 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 PCDHGA1Q9Y5H4 931 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 RTTNQ86VV8 2226 aa16.81■□□□□ 0.28
YBX3-201ENST00000228251 A0A0A6YYD4 124 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 CREBL2O60519 120 aaPredicted RBP16.8■□□□□ 0.28
YBX3-201ENST00000228251 SCGNO76038 276 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 ALX3O95076 343 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 KRTAP27-1Q3LI81 207 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 SPINK14Q6IE38 97 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 ANGPTL5Q86XS5 388 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 LRRC18Q8N456 261 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 GRPEL2Q8TAA5 225 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 ZNF431Q8TF32 576 aaPredicted RBP16.8■□□□□ 0.28
YBX3-201ENST00000228251 CMBLQ96DG6 245 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 CDC6Q99741 560 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 ALX4Q9H161 411 aaPredicted RBP16.8■□□□□ 0.28
YBX3-201ENST00000228251 LPAR5Q9H1C0 372 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 ZMAT3Q9HA38 289 aaKnown RBP16.8■□□□□ 0.28
YBX3-201ENST00000228251 GPN1Q9HCN4 374 aaPredicted RBP16.8■□□□□ 0.28
YBX3-201ENST00000228251 CA10Q9NS85 328 aa16.8■□□□□ 0.28
YBX3-201ENST00000228251 CYTIPO60759 359 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 MPZP25189 248 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 GDF1P27539 372 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 OC90Q02509 493 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 TMEM164Q5U3C3 297 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 AWAT2Q6E213 333 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 OR2M7Q8NG81 312 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 CPT1CQ8TCG5 803 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 ROBO4Q8WZ75 1007 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 PGAM5Q96HS1 289 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 SIGLEC12Q96PQ1 595 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 SPACA5Q96QH8 159 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 EDEM2Q9BV94 578 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 B3GNT4Q9C0J1 378 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 TINAGL1Q9GZM7 467 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 ZNF703Q9H7S9 590 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 TMEM38BQ9NVV0 291 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 BOKQ9UMX3 212 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 MED13Q9UHV7 2174 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 MYO7BQ6PIF6 2116 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 RAB3DO95716 219 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 CST2P09228 141 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 THBS4P35443 961 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 ALDH3B1P43353 468 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 DCAF10Q5QP82 559 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 RIPPLY2Q5TAB7 128 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 COMMD2Q86X83 199 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 FAM109AQ8N4B1 249 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 OR52B4Q8NGK2 314 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 ZNF775Q96BV0 537 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 FAM173AQ9BQD7 235 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 HEXA-AS1Q9H8Q6 139 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 MYOZ1Q9NP98 299 aaPredicted RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 ANAPC10Q9UM13 185 aa16.79■□□□□ 0.28
YBX3-201ENST00000228251 MRPS28Q9Y2Q9 187 aaKnown RBP16.79■□□□□ 0.28
YBX3-201ENST00000228251 LINC01387J3KSC0 135 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 SYNGR3O43761 229 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 TRAPPC6AO75865 159 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 DHRS3O75911 302 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 F10P00742 488 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 HPNP05981 417 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 FCER2P06734 321 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 DBHP09172 617 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 GIPP09681 153 aaPredicted RBP16.78■□□□□ 0.28
YBX3-201ENST00000228251 POU3F2P20265 443 aaPredicted RBP16.78■□□□□ 0.28
YBX3-201ENST00000228251 S100A1P23297 94 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 DNASE1P24855 282 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 OR3A4PP47883 348 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 DHODHQ02127 395 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 ECH1Q13011 328 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 RAB35Q15286 201 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 HYAL4Q2M3T9 481 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 DHRS13Q6UX07 377 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 FJX1Q86VR8 437 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 TMEM104Q8NE00 496 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 CCDC54Q8NEL0 328 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 OR10R2Q8NGX6 335 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 OR8S1Q8NH09 359 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 SLC2A8Q9NY64 477 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 MGAT4CQ9UBM8 478 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 ZNF69Q9UC07 566 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 PCNX2A6NKB5 2137 aa16.78■□□□□ 0.28
YBX3-201ENST00000228251 KNTC1P50748 2209 aa16.77■□□□□ 0.28
YBX3-201ENST00000228251 OR14I1A6ND48 311 aa16.77■□□□□ 0.28
YBX3-201ENST00000228251 F5H5K5 113 aa16.77■□□□□ 0.28
YBX3-201ENST00000228251 M0QYG6 137 aa16.77■□□□□ 0.28
YBX3-201ENST00000228251 M0R135 149 aa16.77■□□□□ 0.28
YBX3-201ENST00000228251 SSX5O60225 188 aa16.77■□□□□ 0.28
YBX3-201ENST00000228251 CYB5AP00167 134 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms