RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 FN3KRPQ9HA64 309 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ACKR4Q9NPB9 350 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 CSAG2Q9Y5P2 127 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 SHANK1Q9Y566 2161 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 A0A1B0GTI1 187 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 TMEM200CA6NKL6 621 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 FAM74A7A6NL05 159 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 A8MXK9 166 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 IGHG1P01857 330 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 SERPINA2P20848 420 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 CLDN17P56750 224 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 CHAF1BQ13112 559 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 FAM74A3Q4VXF1 159 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 PLAC9Q5JTB6 97 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 TMEM88Q6PEY1 159 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 PLPP5Q8NEB5 264 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 POC1BQ8TC44 478 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ELP5Q8TE02 316 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ZC3H10Q96K80 434 aaKnown RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 TMEM59Q9BXS4 323 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 CHMP1AQ9HD42 196 aaPredicted RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 TNFSF18Q9UNG2 199 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 B3GALT5Q9Y2C3 310 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 A0A0A6YYD4 124 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 SULT2B1O00204 365 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 WDPCPO95876 746 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 HPP00738 406 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 CD74P04233 296 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 HOXB5P09067 269 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 GABREP78334 506 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 C1QL2Q7Z5L3 287 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 TMED6Q8WW62 240 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 SLC39A7Q92504 469 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 FOXRED1Q96CU9 486 aaPredicted RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 LRRC46Q96FV0 321 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 PGAM5Q96HS1 289 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 SHARPINQ9H0F6 387 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 LPAR5Q9H1C0 372 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 ZNF701Q9NV72 531 aaPredicted RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 ALKBH4Q9NXW9 302 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 TUBAL3A6NHL2 446 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 EFSO43281 561 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 MBTPS2O43462 519 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 RAD51DO75771 328 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 CASRP41180 1078 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 OR3A2P47893 321 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 CX3CR1P49238 355 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 AFF3P51826 1226 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 NKAPLQ5M9Q1 402 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 SLC25A42Q86VD7 318 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 BPIFCQ8NFQ6 507 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 ZNF878C9JN71 531 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 E9PLN8 166 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 ISG15P05161 165 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 AMY2BP19961 511 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 MC2RQ01718 297 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 RHBDD2Q6NTF9 364 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 BATF2Q8N1L9 274 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 KCNRGQ8N5I3 272 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 NFAM1Q8NET5 270 aaPredicted RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 GNRHR2Q96P88 292 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 WDR77Q9BQA1 342 aaPredicted RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 RBM24Q9BX46 236 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 RARRES3Q9UL19 164 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 A0A0D9SG52 128 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 OR5H15A6NDH6 313 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 PCP4L1A6NKN8 68 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 ZNHIT1O43257 154 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 AQP8O94778 261 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 TPPPO94811 219 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 F12P00748 615 aaPredicted RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 SFTPBP07988 381 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 DBHP09172 617 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 UBBP0CG47 229 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 GLULP15104 373 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 FAHP16930 419 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 S100A10P60903 97 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 RPS27AP62979 156 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 UBA52P62987 128 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 SSBP1Q04837 148 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 SMAD4Q13485 552 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 SNTB1Q13884 538 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 ZNF273Q14593 569 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 PLPPR5Q32ZL2 321 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 OR5AS1Q8N127 324 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 ZNF416Q9BWM5 594 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 METTL8Q9H825 291 aaKnown RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 RASL12Q9NYN1 266 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 MYOTQ9UBF9 498 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 PCDHB10Q9UN67 800 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 RHBDD3Q9Y3P4 386 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 COL6A3P12111 3177 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 NUP210LQ5VU65 1888 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 OR6C76A6NM76 312 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 STMND1H3BQB6 276 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 TRAF3IP2O43734 574 aaPredicted RBP7.33□□□□□ -1.24
CDC27-201ENST00000066544 IGHMP01871 453 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 FGL1Q08830 312 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 ACOT7LQ6ZUV0 252 aa7.33□□□□□ -1.24
CDC27-201ENST00000066544 OR51T1Q8NGJ9 327 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms