RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ubqln3Q8C5U9 658 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr672Q8VG28 312 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Flvcr2Q91X85 551 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Egln2Q91YE2 419 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nudcd2Q9CQ48 157 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm21294A0A087WS79 222 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rabl2E9Q9D5 223 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r89O35199 507 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Capza1P47753 286 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rps15aP62245 130 aaKnown RBP15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 CycsP62897 105 aaKnown RBP15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Masp1P98064 704 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Mtch2Q791V5 303 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr259Q7TS20 312 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ston1Q8CDJ8 730 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Akr7a2Q8CG76 367 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1484Q8VEU6 315 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr394Q8VGR5 310 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tmem138Q9D6G5 162 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Slc9a3r2Q9JHL1 337 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Klhl1Q9JI74 751 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 MyotQ9JIF9 496 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 GraspQ9JJA9 392 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Fgf21Q9JJN1 210 aa15.18■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr889L7N1Y6 314 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 H2-T23P06339 357 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tacr3P47937 452 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Nup43P59235 380 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Actr1aP61164 376 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 BidP70444 195 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 ElocP83940 112 aaKnown RBP15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 H2-Eb2Q3UUV9 287 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Alkal2Q80UG6 151 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 TMEM229BQ8BFQ2 167 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Defb19Q8K3I8 83 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r208Q8R275 308 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r73Q8R293 303 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Aspscr1Q8VBT9 550 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Pga5Q9D106 387 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Psma1Q9R1P4 263 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 March7Q9WV66 693 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm21858A0A087WQ24 222 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Spaca5A2AE20 160 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn2r66K7N6R9 851 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 CtssO70370 340 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cd8aP01731 247 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 PipP02816 146 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Htr2aP35363 471 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Pcbp4P57724 403 aaKnown RBP15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Esp1Q3LHH8 102 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ptpn21Q62136 1176 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Flrt1Q6RKD8 674 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tsen54Q8C2A2 525 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr45Q8VGM1 311 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Mrgpra5Q91ZC7 304 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Rnf141Q99MB7 230 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tomm34Q9CYG7 309 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 TsfmQ9CZR8 324 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Shisa5Q9D7I0 235 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Aurkaip1Q9DCJ7 200 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 DmdP11531 3678 aa15.17■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tas2r122D3YU55 309 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Il7rP16872 459 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 NfkbidQ2TB02 327 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tmem230Q8CIB6 120 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr1002Q8VFK2 318 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr525Q8VGL5 309 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 NanpQ9CPT3 248 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Mrpl41Q9CQN7 135 aaKnown RBP15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cldn12Q9ET43 244 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 AgrnA2ASQ1 1950 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Prob1A0A087WR45 1010 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Prps1l3G3UXL2 318 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm10881P01642 115 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 IapP24822 559 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Fndc4Q3TR08 231 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Hormad2Q5SQP1 306 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Alkbh2Q6P6J4 239 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Arrb1Q8BWG8 418 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 HpgdQ8VCC1 269 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr830Q8VFJ5 315 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tm4sf4Q91XD3 202 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ufsp2Q99K23 461 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Prps1Q9D7G0 318 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ak3Q9WTP7 227 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 1700015F17RikD3YUK8 150 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Gm21820J3KMU2 361 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Igfbp2P47877 305 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 BckdhbQ6P3A8 390 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tas2r136Q7TQA8 305 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Olfr967Q7TRA6 310 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Fbxw17Q8CFE8 466 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Tram1Q91V04 374 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Atp5sQ9CRA7 200 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 9330161L09RikQ9D253 136 aa15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Cdc40Q9DC48 579 aaKnown RBP15.16■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Pramef6A2A8M8 474 aa15.15■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Vmn1r168K7N6B6 309 aa15.15■□□□□ 0.02
Ctcf-201ENSMUST00000005841 Ntn1O09118 604 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms