RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 CD300LBA8K4G0 201 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 ARPC2O15144 300 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 GMDSO60547 372 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
CLN6-220ENST00000637450 ZNF823P16415 610 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 CA6P23280 308 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 HMGA2P52926 109 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 OR8G1Q15617 311 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 SAMD4BQ5PRF9 694 aaKnown RBP15.37■□□□□ 0.05
CLN6-220ENST00000637450 C16orf87Q6PH81 154 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 MRPL21Q7Z2W9 205 aaKnown RBP15.37■□□□□ 0.05
CLN6-220ENST00000637450 ZNRF4Q8WWF5 429 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 TAF15Q92804 592 aaKnown RBP eCLIP15.37■□□□□ 0.05
CLN6-220ENST00000637450 CDRT15Q96T59 188 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 NSRP1Q9H0G5 558 aaKnown RBP15.37■□□□□ 0.05
CLN6-220ENST00000637450 EGLN3Q9H6Z9 239 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 RNF7Q9UBF6 113 aa15.37■□□□□ 0.05
CLN6-220ENST00000637450 NOP16Q9Y3C1 178 aaKnown RBP15.37■□□□□ 0.05
CLN6-220ENST00000637450 MDFIC2A0A1B0GVS7 189 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 C22orf46C9J442 243 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 BHLHE40O14503 412 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 SNX3O60493 162 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 ANOS1P23352 680 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 OTX1P32242 354 aaPredicted RBP15.36■□□□□ 0.05
CLN6-220ENST00000637450 PYCR1P32322 319 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 RPS27P42677 84 aaKnown RBP15.36■□□□□ 0.05
CLN6-220ENST00000637450 NPY4RP50391 375 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 BPIFB3P59826 476 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 FGF12P61328 243 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 HOXA4Q00056 320 aaPredicted RBP15.36■□□□□ 0.05
CLN6-220ENST00000637450 ZNF92Q03936 586 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 SNAI3Q3KNW1 292 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 ZNF362Q5T0B9 420 aaPredicted RBP15.36■□□□□ 0.05
CLN6-220ENST00000637450 ZDHHC21Q8IVQ6 265 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 PGAM4Q8N0Y7 254 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 CYB561A3Q8NBI2 242 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 PLPP7Q8NBV4 271 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 FN3KRPQ9HA64 309 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 CDH10Q9Y6N8 788 aa15.36■□□□□ 0.05
CLN6-220ENST00000637450 TVP23AA6NH52 213 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 TNFRSF13BO14836 293 aaPredicted RBP15.35■□□□□ 0.05
CLN6-220ENST00000637450 ENSAO43768 121 aaKnown RBP15.35■□□□□ 0.05
CLN6-220ENST00000637450 KRT36O76013 467 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 KCNJ8Q15842 424 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 DEFB112Q30KQ8 113 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 RPL13AP3Q6NVV1 102 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 DRAM2Q6UX65 266 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 BRD3OSQ6XYD6 125 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 PROKR2Q8NFJ6 384 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 OR52L1Q8NGH7 329 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 OR2T4Q8NH00 348 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 FAM107BQ9H098 131 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 IL20Q9NYY1 176 aa15.35■□□□□ 0.05
CLN6-220ENST00000637450 DOCK11Q5JSL3 2073 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 C5orf63A6NC05 138 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 GGT3PA6NGU5 568 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 LGALS8O00214 317 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 HOXA3O43365 443 aaPredicted RBP15.34■□□□□ 0.05
CLN6-220ENST00000637450 PSKH1P11801 424 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 GLYATL3Q5SZD4 288 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 GPR157Q5UAW9 335 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 CD276Q5ZPR3 534 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 SFRP4Q6FHJ7 346 aaPredicted RBP15.34■□□□□ 0.05
CLN6-220ENST00000637450 LINC00471Q8N535 108 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 OR2AE1Q8NHA4 323 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 TMIGD2Q96BF3 282 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 BTBD10Q9BSF8 475 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 ADAT1Q9BUB4 502 aaKnown RBP15.34■□□□□ 0.05
CLN6-220ENST00000637450 TRIM15Q9C019 465 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 SLITRK2Q9H156 845 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 MMADHCQ9H3L0 296 aaPredicted RBP15.34■□□□□ 0.05
CLN6-220ENST00000637450 MRPL15Q9P015 296 aaKnown RBP15.34■□□□□ 0.05
CLN6-220ENST00000637450 ERVK-18Q9QC07 812 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 CTSZQ9UBR2 303 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 LYVE1Q9Y5Y7 322 aa15.34■□□□□ 0.05
CLN6-220ENST00000637450 KCNAB3O43448 404 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 GASTP01350 101 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 LIPFP07098 398 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 MDKP21741 143 aaPredicted RBP15.33■□□□□ 0.04
CLN6-220ENST00000637450 PCK2Q16822 640 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 ZNF770Q6IQ21 691 aaPredicted RBP15.33■□□□□ 0.04
CLN6-220ENST00000637450 LYPD4Q6UWN0 246 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 DCXRQ7Z4W1 244 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 BOLLQ8N9W6 283 aaKnown RBP15.33■□□□□ 0.04
CLN6-220ENST00000637450 SPERTQ8NA61 448 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 SLC37A3Q8NCC5 494 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 OR9Q2Q8NGE9 314 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 OR51L1Q8NGJ5 315 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 OR4C15Q8NGM1 316 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 OR8D4Q8NGM9 314 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 ZDHHC16Q969W1 377 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 TECTBQ96PL2 329 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 NOX4Q9NPH5 578 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 MMP24Q9Y5R2 645 aa15.33■□□□□ 0.04
CLN6-220ENST00000637450 SRRM5B3KS81 715 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 ZNF879B4DU55 563 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 C3orf80F5H4A9 247 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 TNFRSF11BO00300 401 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 NDUFA2O43678 99 aa15.32■□□□□ 0.04
CLN6-220ENST00000637450 MMP9P14780 707 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms