RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 HSD11B1P28845 292 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 MMP16P51512 607 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 GRB2P62993 217 aaKnown RBP11.64□□□□□ -0.55
PNKP-228ENST00000637325 LCN2P80188 198 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 SCGB2A2Q13296 93 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 PCK2Q16822 640 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 SNAI3Q3KNW1 292 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 DCAF12L2Q5VW00 463 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 LIPNQ5VXI9 398 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 SHFQ7M4L6 423 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 TEX29Q8N6K0 151 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 PAPD5Q8NDF8 572 aaKnown RBP11.64□□□□□ -0.55
PNKP-228ENST00000637325 SPATA3Q8NHX4 192 aa11.64□□□□□ -0.55
PNKP-228ENST00000637325 ZNF420Q8TAQ5 688 aaPredicted RBP11.64□□□□□ -0.55
PNKP-228ENST00000637325 METTL17Q9H7H0 456 aaPredicted RBP11.64□□□□□ -0.55
PNKP-228ENST00000637325 NOP16Q9Y3C1 178 aaKnown RBP11.64□□□□□ -0.55
PNKP-228ENST00000637325 CD300LBA8K4G0 201 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 TMEM178BH3BS89 294 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 TBX1O43435 398 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 TIPRLO75663 272 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 ANXA2P07355 339 aaKnown RBP11.63□□□□□ -0.55
PNKP-228ENST00000637325 SLC2A1P11166 492 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
PNKP-228ENST00000637325 MDH2P40926 338 aaKnown RBP11.63□□□□□ -0.55
PNKP-228ENST00000637325 CX3CR1P49238 355 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 ZNF92Q03936 586 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 OR8G1Q15617 311 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 TMEM155Q4W5P6 130 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 KLHL12Q53G59 568 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 GLYATL3Q5SZD4 288 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 PLBD1Q6P4A8 553 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 DPY19L4Q7Z388 723 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 LRRC28Q86X40 367 aaPredicted RBP11.63□□□□□ -0.55
PNKP-228ENST00000637325 C1orf87Q8N0U7 546 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 MUC20Q8N307 709 aaPredicted RBP11.63□□□□□ -0.55
PNKP-228ENST00000637325 RFLNBQ8N5W9 214 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 OR2AE1Q8NHA4 323 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 ZMYND19Q96E35 227 aaPredicted RBP11.63□□□□□ -0.55
PNKP-228ENST00000637325 NRBF2Q96F24 287 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 SLC22A4Q9H015 551 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 TOR3AQ9H497 397 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 OCEL1Q9H607 264 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 SP140LQ9H930 580 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 G6PC2Q9NQR9 355 aa11.63□□□□□ -0.55
PNKP-228ENST00000637325 J3QLI3 93 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 XRCC2O43543 280 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 TCF21O43680 179 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 CYB5R3P00387 301 aaPredicted RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 APOC1P02654 83 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 CA6P23280 308 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 OTX1P32242 354 aaPredicted RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 RPS7P62081 194 aaKnown RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 CDK5Q00535 292 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 ZMYND11Q15326 602 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 TIGD6Q17RP2 521 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 CPOQ8IVL8 374 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 OR11L1Q8NGX0 322 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 DNAJC9Q8WXX5 260 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 SIGLEC11Q96RL6 698 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 ABHD6Q9BV23 337 aa11.62□□□□□ -0.55
PNKP-228ENST00000637325 REPIN1Q9BWE0 567 aaKnown RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 PATZ1Q9HBE1 687 aaKnown RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 PAPOLBQ9NRJ5 636 aaKnown RBP11.62□□□□□ -0.55
PNKP-228ENST00000637325 DNHD1Q96M86 4753 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 LOC105371242A0A075B767 164 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 ZNF205O95201 554 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 H2BFMP0C1H6 154 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 GATA3P23771 443 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 SRSF2Q01130 221 aaKnown RBP11.61□□□□□ -0.55
PNKP-228ENST00000637325 SNAPC1Q16533 368 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 C1orf146Q5VVC0 180 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 TMEM236Q5W0B7 351 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 PHC2Q8IXK0 858 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 CELF2-AS1Q8N7Q2 184 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 OR5K1Q8NHB7 308 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 THEM6Q8WUY1 208 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 RNF133Q8WVZ7 376 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 ERGIC1Q969X5 290 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 ADAT1Q9BUB4 502 aaKnown RBP11.61□□□□□ -0.55
PNKP-228ENST00000637325 MMADHCQ9H3L0 296 aaPredicted RBP11.61□□□□□ -0.55
PNKP-228ENST00000637325 OPA3Q9H6K4 179 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 MARCH7Q9H992 704 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 SLC25A19Q9HC21 320 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 TVP23BQ9NYZ1 205 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 DNAJC27Q9NZQ0 273 aa11.61□□□□□ -0.55
PNKP-228ENST00000637325 PPIAL4EA0A075B759 164 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.6□□□□□ -0.55
PNKP-228ENST00000637325 A0A1B0GWJ7 208 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 C5orf63A6NC05 138 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 ANKRD30BLA7E2S9 258 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 PPIAL4DF5H284 164 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 PRODHO43272 600 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 GMDSO60547 372 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 SELENOFO60613 162 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 CIB2O75838 187 aa11.6□□□□□ -0.55
PNKP-228ENST00000637325 LYNP07948 512 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms