RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 WBP2Q969T9 261 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 RAB22AQ9UL26 194 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 MOKQ9UQ07 419 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 IGHV3OR15-7A0A075B7D8 119 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 CNR1P21554 472 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 HOXA4Q00056 320 aaPredicted RBP16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 OR2F1Q13607 317 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 OR2T2Q6IF00 324 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 CBLL1Q75N03 491 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 OR10P1Q8NGE3 313 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 RNF167Q9H6Y7 350 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 RABAC1Q9UI14 185 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 PAPLNO95428 1278 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 HBE1P02100 147 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 CD300LGQ6UXG3 332 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC25A5P05141 298 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 PPP3CBP16298 524 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 DEFA6Q01524 100 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC48A1Q6P1K1 146 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 ADAMTS14Q8WXS8 1223 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 TMEM140Q9NV12 185 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 MMP17Q9ULZ9 603 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 H3BVH4 76 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 ACOT8O14734 319 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 FGF17O60258 216 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 OR2C1O95371 312 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 G6PCP35575 357 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 LSMEM2Q8N112 164 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 POLDIP2Q9Y2S7 368 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 MS4A18H0YCH9 400 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 TMPRSS2O15393 492 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 FCGR3BO75015 233 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 WNT1P04628 370 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 RAB40ALP0C0E4 278 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 ERVFC1-1P60608 527 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 DUSP6Q16828 381 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 MS4A18Q3C1V0 323 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 RBPMS2Q6ZRY4 209 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF573Q86YE8 665 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 RAB40AQ8WXH6 277 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 PRDM14Q9GZV8 571 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 AAMDCQ9H7C9 122 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 HSPE1-MOB4S4R3N1 261 aa16.16■□□□□ 0.18
CACNA1A-227ENST00000636549 SPAARA0A1B0GVQ0 90 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PCGF1Q9BSM1 259 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 LIN7CQ9NUP9 197 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC22A13Q9Y226 551 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 IGKV6-21A0A0C4DH24 114 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PATE4P0C8F1 98 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SRFP11831 508 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 ELK1P19419 428 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SIX1Q15475 284 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 ECSCRQ19T08 205 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SIGLECL1Q8N7X8 197 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 OR2M2Q96R28 347 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 ZDHHC5Q9C0B5 715 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 IGHV3OR16-10A0A075B7F0 116 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 IL9P15248 144 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 FABP9Q0Z7S8 132 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SYT6Q5T7P8 510 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 TMEM81Q6P7N7 255 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 VWA1Q6PCB0 445 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 C15orf39Q6ZRI6 1047 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 OPALINQ96PE5 141 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 CGB1A6NKQ9 187 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PSMB2P49721 201 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 TNXAQ16473 311 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 RNF2Q99496 336 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SORT1Q99523 831 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC26A1Q9H2B4 701 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 CEACAM6P40199 344 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PYCR3Q53H96 274 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PXT1Q8NFP0 134 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 GALMQ96C23 342 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 DUS3LQ96G46 650 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PLPP1O14494 284 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 KLKB1P03952 638 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 PFN3P60673 137 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 DBPQ10586 325 aaPredicted RBP16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 OR4D10Q8NGI6 311 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 RXFP4Q8TDU9 374 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 VPS25Q9BRG1 176 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 KIR3DX1Q9H7L2 352 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 FBXL4Q9UKA2 621 aa16.15■□□□□ 0.18
CACNA1A-227ENST00000636549 SNRPCP09234 159 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 FOXF1Q12946 379 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 GGTLC2Q14390 218 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 F2RL2O00254 374 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 BSGP35613 385 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 DLX5P56178 289 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 SNRPNP63162 240 aaKnown RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 UBTD2Q8WUN7 234 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 BOLA1Q9Y3E2 137 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 A0A087WZY1 265 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 IGKV6D-21A0A0A0MT36 114 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 SNNO75324 88 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 KRASP01116 189 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 T-ENOLP0DO92 83 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 CD200P41217 278 aa16.14■□□□□ 0.17
CACNA1A-227ENST00000636549 PNLIPRP2P54317 469 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms