RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	NEUROG3	Q9Y4Z2	214 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SAR1B	Q9Y6B6	198 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MUC22	E2RYF6	1773 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CEP250	Q9BV73	2442 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PI4KA	P42356	2102 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	FRYL	O94915	3013 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	VPS13A	Q96RL7	3174 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CABIN1	Q9Y6J0	2220 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392		A0A0J9YXY3	114 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	C1orf232	A0A0U1RR37	186 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SPTY2D1-AS1	A0A0U1RR47	76 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392		A0A1B0GTQ1	180 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RNF13	O43567	381 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	AGT	P01019	485 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TNF	P01375	233 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RALB	P11234	206 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CTSE	P14091	401 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KLK2	P20151	261 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CASQ1	P31415	396 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GPR1	P46091	355 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SPINT3	P49223	89 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	STC1	P52823	247 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PFN3	P60673	137 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KCNJ2	P63252	427 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CDH17	Q12864	832 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ILK	Q13418	452 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SF3A2	Q15428	464 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TAF1A	Q15573	450 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KRTAP27-1	Q3LI81	207 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RNF212	Q495C1	297 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CARD17	Q5XLA6	110 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GKN2	Q86XP6	184 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SLC35F6	Q8N357	371 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TRAM1L1	Q8N609	369 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ACOT4	Q8N9L9	421 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SPATA4	Q8NEY3	305 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PEX13	Q92968	403 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MAGOHB	Q96A72	148 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RPUSD4	Q96CM3	377 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF514	Q96K75	400 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TRIB3	Q96RU7	358 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KLF6	Q99612	283 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TBL1Y	Q9BQ87	522 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TRPM6	Q9BX84	2022 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MFF	Q9GZY8	342 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	INPP5E	Q9NRR6	644 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PACSIN2	Q9UNF0	486 aa	Predicted RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SPTBN4	Q9H254	2564 aa		4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CNOT1	A5YKK6	2376 aa	Known RBP	4.25	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NUMA1	Q14980	2115 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR5K4	A6NMS3	321 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TMX2-CTNND1	H3BSU7	103 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KLHL41	O60662	606 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SERPIND1	P05546	499 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IVL	P07476	585 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MLN	P12872	115 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	BTC	P35070	178 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	COIL	P38432	576 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CKAP4	Q07065	602 aa	Known RBP	4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IRF4	Q15306	451 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PPP1R7	Q15435	360 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LRRC74B	Q6ZQY2	392 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	C19orf35	Q6ZS72	473 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GLT6D1	Q7Z4J2	308 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TGIF2LY	Q8IUE0	185 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF100	Q8IYN0	542 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DNAAF3	Q8N9W5	541 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	BBOF1	Q8ND07	529 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MNS1	Q8NEH6	495 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR56A4	Q8NGH8	313 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ANKRD49	Q8WVL7	239 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	C1orf54	Q8WWF1	131 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ELMO1	Q92556	727 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KLK6	Q92876	244 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NAT6	Q93015	286 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	BMF	Q96LC9	184 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR8B4	Q96RC9	309 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NAT9	Q9BTE0	207 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IL22	Q9GZX6	179 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RACGAP1	Q9H0H5	632 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CLCF1	Q9UBD9	225 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TMED5	Q9Y3A6	229 aa		4.24	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GLYATL1P3	A0A0U1RQE8	302 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	FAM231B	A6NCW3	169 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TCP11X1	B4DZS4	312 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KMO	O15229	486 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	AQP9	O43315	295 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CTAG2	O75638	210 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SLC25A14	O95258	325 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LDOC1	O95751	146 aa	Predicted RBP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KRT14	P02533	472 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GP1BA	P07359	652 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TROVE2	P10155	538 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZBTB25	P24278	435 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SPAM1	P38567	509 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GLP1R	P43220	463 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MAGEA6	P43360	314 aa		4.23	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NPBWR2	P48146	333 aa		4.23	□□□□□ -1.73

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