RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 MEIOCA2RUB1 952 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 SGCEO43556 437 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
LINC00339-208ENST00000634934 PPP3CBP16298 524 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ALOX5APP20292 161 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ACTC1P68032 377 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ACTA1P68133 377 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 SORDQ00796 357 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 PSG4Q00888 419 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 PABPC1L2AQ5JQF8 200 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ATAD3CQ5T2N8 411 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF774Q6NX45 483 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 FAM131AQ6UXB0 335 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 CFAP77Q6ZQR2 320 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 TCTE3Q8IZS6 198 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 RFLNBQ8N5W9 214 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ACBD7Q8N6N7 88 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 LINC01560Q8TB33 94 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 MAP6Q96JE9 813 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 WFIKKN1Q96NZ8 548 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 MNTQ99583 582 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 KCNJ15Q99712 375 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 WACQ9BTA9 647 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 CENPMQ9NSP4 180 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 C14orf119Q9NWQ9 140 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 PLEK2Q9NYT0 353 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 NDRG3Q9UGV2 375 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 N6AMT1Q9Y5N5 214 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
LINC00339-208ENST00000634934 CACNA1CQ13936 2221 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ADGRG4Q8IZF6 3080 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 DOK2O60496 412 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 TMEM127O75204 238 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 COL8A1P27658 744 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 MTNR1BP49286 362 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF83P51522 516 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 PLP2Q04941 152 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 C22orf42Q6IC83 251 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 C22orf34Q6ZV56 151 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 LHFPL3Q86UP9 236 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 WFDC8Q8IUA0 241 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 ST7LQ8TDW4 575 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 SLC7A6Q92536 515 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 SLAMF6Q96DU3 332 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 DIRAS2Q96HU8 199 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 AMELYQ99218 206 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 WNT5BQ9H1J7 359 aa12.57□□□□□ -0.4
LINC00339-208ENST00000634934 RBFOX1Q9NWB1 397 aaKnown RBP12.57□□□□□ -0.4
LINC00339-208ENST00000634934 TUBAL3A6NHL2 446 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 PSMD9O00233 223 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 PHYHO14832 338 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 CBR1P16152 277 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 EVX1P49640 407 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-208ENST00000634934 RPS25P62851 125 aaKnown RBP12.56□□□□□ -0.4
LINC00339-208ENST00000634934 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 FABP5Q01469 135 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 RAB35Q15286 201 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 TAF13Q15543 124 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 ELFN2Q5R3F8 820 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 HIST2H3PS2Q5TEC6 136 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 MZT2BQ6NZ67 158 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF322Q6U7Q0 402 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-208ENST00000634934 HIST2H3AQ71DI3 136 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 VASH1Q7L8A9 365 aaPredicted RBP12.56□□□□□ -0.4
LINC00339-208ENST00000634934 SSX6Q7RTT6 188 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 ASB17Q8WXJ9 295 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 SLA2Q9H6Q3 261 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
LINC00339-208ENST00000634934 CENPXA8MT69 81 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 C19orf84I3L1E1 186 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 M0R1B8 84 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 MAGEB4O15481 346 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-208ENST00000634934 THBDP07204 575 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 CELA3BP08861 270 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 FAM157BP0CG42 384 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 APEX1P27695 318 aaKnown RBP12.55□□□□□ -0.4
LINC00339-208ENST00000634934 HTR5AP47898 357 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 TAS2R43P59537 309 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 ZNF85Q03923 595 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 CDK10Q15131 360 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 ZFP69Q49AA0 526 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 KCTD18Q6PI47 426 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-208ENST00000634934 KRT77Q7Z794 578 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 CDH24Q86UP0 819 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 TPRA1Q86W33 373 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 CPEB3Q8NE35 698 aaKnown RBP12.55□□□□□ -0.4
LINC00339-208ENST00000634934 OR10S1Q8NGN2 331 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 OR1F12Q8NHA8 337 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 SNX33Q8WV41 574 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 RNF133Q8WVZ7 376 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 HDHD2Q9H0R4 259 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 NIPAL2Q9H841 368 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 SLCO1C1Q9NYB5 712 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 RABL2AQ9UBK7 228 aaPredicted RBP12.55□□□□□ -0.4
LINC00339-208ENST00000634934 RABL2BQ9UNT1 228 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 FLNBO75369 2602 aaKnown RBP12.55□□□□□ -0.4
LINC00339-208ENST00000634934 CRYBG3Q68DQ2 2970 aa12.55□□□□□ -0.4
LINC00339-208ENST00000634934 PRR32B1ATL7 298 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms