RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 SRMP19623 302 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 CTSSP25774 331 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 CX3CR1P49238 355 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 PCBD1P61457 104 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 GALK2Q01415 458 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 SF3B4Q15427 424 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC25A35Q3KQZ1 300 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 ELFN2Q5R3F8 820 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF627Q7L945 461 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC16A14Q7RTX9 510 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 CCDC190Q86UF4 302 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 NAA40Q86UY6 237 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 LAX1Q8IWV1 398 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF283Q8N7M2 679 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 BORCS5Q969J3 196 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 KCNJ15Q99712 375 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 WACQ9BTA9 647 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 PBOV1Q9GZY1 135 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 HDHD2Q9H0R4 259 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 C12orf49Q9H741 205 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 TCF7L1Q9HCS4 588 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 NUFIP1Q9UHK0 495 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 PRSS50Q9UI38 385 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 HHLA2Q9UM44 414 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 DHDHQ9UQ10 334 aa8.29□□□□□ -1.08
PDLIM5-223ENST00000627587 LOC107986453A0A1B0GWG9 222 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF503-AS2A6NEH8 195 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 PDCD5O14737 125 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SGCEO43556 437 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SYNGR3O43761 229 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 APOC1P02654 83 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 MMP7P09237 267 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ACSM4P0C7M7 580 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ACHEP22303 614 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 CRYGSP22914 178 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ETV6P41212 452 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF121P58317 390 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 HGFACQ04756 655 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 FAPQ12884 760 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 RAB35Q15286 201 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 DDI2Q5TDH0 399 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SFXN4Q6P4A7 337 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 MZT2AQ6P582 158 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SEM1Q6ZVN7 128 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 LUZP2Q86TE4 346 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SKA3Q8IX90 412 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ELMOD2Q8IZ81 293 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 LILRB4Q8NHJ6 448 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 FAM57AQ8TBR7 257 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ACOT12Q8WYK0 555 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC7A6Q92536 515 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SOX7Q9BT81 388 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 CMAHPQ9Y471 501 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 TIMM10BQ9Y5J6 103 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 MED13LQ71F56 2210 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 A0A1B0GTI1 187 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 NOTOA8MTQ0 251 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 F5H5K5 113 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 IL18BPO95998 194 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ANXA2P07355 339 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 DBHP09172 617 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC2A1P11166 492 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC2A2P11168 524 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 GABRA1P14867 456 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF32P17041 273 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 TNFSF8P32971 234 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 OR3A2P47893 321 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SLC6A9P48067 706 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ARF1P84077 181 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 IFITM3Q01628 133 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF45Q02386 682 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ECH1Q13011 328 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 KRTAP27-1Q3LI81 207 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ACSF3Q4G176 576 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SPANXN2Q5MJ10 180 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 IDNKQ5T6J7 187 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 C9orf135Q5VTT2 229 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 FBXW9Q5XUX1 488 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 OR2A2Q6IF42 318 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 ZNF585AQ6P3V2 769 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 STAC2Q6ZMT1 411 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 FAM214BQ7L5A3 538 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 LRRTM1Q86UE6 522 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SNX29P2Q8IUI4 249 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 GCNT2Q8N0V5 402 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 C9orf106Q8NAJ2 232 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SPTSSAQ969W0 71 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 WDFY2Q96P53 400 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 SDHCQ99643 169 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 TP63Q9H3D4 680 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 NOX3Q9HBY0 568 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 COMMD3Q9UBI1 195 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 MALT1Q9UDY8 824 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 DAPK2Q9UIK4 370 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 N6AMT1Q9Y5N5 214 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 V9GYH0 126 aa8.28□□□□□ -1.08
PDLIM5-223ENST00000627587 TACC2O95359 2948 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms