RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 EIF4E2O60573 245 aaKnown RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SRPX2O60687 465 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PMP2P02689 132 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 GLI4P10075 376 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 NR2C1P13056 603 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 NME2P22392 152 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 GABRR1P24046 479 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PLGLB1Q02325 96 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 HNF4GQ14541 408 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF704Q6ZNC4 412 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SLC16A9Q7RTY1 509 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 EIF4E3Q8N5X7 224 aaKnown RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 OR5M8Q8NGP6 311 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SLAMF9Q96A28 289 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 BORCS8Q96FH0 119 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 TEX101Q9BY14 249 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 ETV7Q9Y603 341 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 THSD7BQ9C0I4 1608 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 LOC100289279A0A1B0GTE1 492 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 A0A1W2PPC1 479 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 MPTX1A8MV57 137 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 ADAP1O75689 374 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 LCATP04180 440 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CD14P08571 375 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PNMTP11086 282 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 HTR2CP28335 458 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 TACR3P29371 465 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CD80P33681 288 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 RPL18Q07020 188 aaKnown RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PEA15Q15121 130 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PPA1Q15181 289 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 RSU1Q15404 277 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 INPP5JQ15735 1006 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CEBPEQ15744 281 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 AVPI1Q5T686 147 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 TMEM92Q6UXU6 159 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PRR18Q8N4B5 295 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SCGB1C1Q8TD33 95 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 FOXRED1Q96CU9 486 aaPredicted RBP6.25□□□□□ -1.41
NEDD9-216ENST00000620854 C14orf79Q96F83 325 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SGCZQ96LD1 299 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 GABRG3Q99928 467 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 FAM117AQ9C073 453 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CACNA1DQ01668 2161 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 A0A087WUJ7 227 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 C2orf72A6NCS6 295 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SLC2A1P11166 492 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 COL9A1P20849 921 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 MAOAP21397 527 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 HRH1P35367 487 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SERPINF1P36955 418 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 KIR3DL2P43630 455 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CLDN6P56747 220 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CORO6Q6QEF8 472 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CLEC9AQ6UXN8 241 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF679Q8IYX0 411 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 IL22RA1Q8N6P7 574 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 OR5AP2Q8NGF4 316 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 OR13C8Q8NGS7 320 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 GLYATL2Q8WU03 294 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PHYHIPQ92561 330 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CMTM3Q96MX0 182 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SPSB2Q99619 263 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 CHRDQ9H2X0 955 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PLEKHJ1Q9NW61 149 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 COA4Q9NYJ1 87 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 PLEK2Q9NYT0 353 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 SLC7A11Q9UPY5 501 aa6.25□□□□□ -1.41
NEDD9-216ENST00000620854 DENND4AQ7Z401 1863 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 AKAP6Q13023 2319 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 FAM230AA0A1W2PPH8 454 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 K7EQS6 105 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ICOSLGO75144 302 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ITGB2P05107 769 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 GNB3P16520 340 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 EPHA1P21709 976 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 RPS4Y1P22090 263 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR2B8PP59922 312 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ZP2Q05996 745 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF528Q3MIS6 628 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 FHL5Q5TD97 284 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 PAPD4Q6PIY7 484 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR1M1Q8NGA1 313 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR4D6Q8NGJ1 314 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 MARCH1Q8TCQ1 289 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ZNF524Q96C55 264 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 VWCEQ96DN2 955 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SLC41A2Q96JW4 573 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SEMA6CQ9H3T2 930 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 KCNJ16Q9NPI9 418 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 SRPK3Q9UPE1 567 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 EMC9Q9Y3B6 208 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 TIMM8BQ9Y5J9 83 aaPredicted RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 MEX3AA1L020 520 aaKnown RBP6.24□□□□□ -1.41
NEDD9-216ENST00000620854 MSGN1A6NI15 193 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 PHYHO14832 338 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 STK17BO94768 372 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 OR2F2O95006 317 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 FABP1P07148 127 aa6.24□□□□□ -1.41
NEDD9-216ENST00000620854 ACAA1P09110 424 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms