RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 HIST2H3PS2Q5TEC6 136 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM229BQ8NBD8 167 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 TERB2Q8NHR7 220 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 NUDCD2Q8WVJ2 157 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 GPR173Q9NS66 373 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 RALGAPA2Q2PPJ7 1873 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 POLR2AP24928 1970 aaKnown RBP7.54□□□□□ -1.2
ALMS1-208ENST00000620466 APOA2P02652 100 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 CNR1P21554 472 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 HBG1P69891 147 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 HBG2P69892 147 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 SHHQ15465 462 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 SIGLEC11Q96RL6 698 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 TCEAL2Q9H3H9 227 aaPredicted RBP7.54□□□□□ -1.2
ALMS1-208ENST00000620466 PRELID3BQ9Y3B1 194 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 A0A0G2JMZ2 1700 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 LRRC37A2A6NM11 1700 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 SGCEO43556 437 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 IL5P05113 134 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 UBE2G2P60604 165 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 SLC25A30Q5SVS4 291 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 LYG2Q86SG7 212 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 GCNT2Q8N0V5 402 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 NANPQ8TBE9 248 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 ZCCHC4Q9H5U6 513 aa7.54□□□□□ -1.2
ALMS1-208ENST00000620466 A0A1W2PPV9 198 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 CRYM-AS1A6NIL9 109 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 BHLHE40O14503 412 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 PRRG2O14669 202 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TRAF3IP2O43734 574 aaPredicted RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM127O75204 238 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 NAT2P11245 290 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ALOX5APP20292 161 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 MAGEB1P43366 347 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 UBE2KP61086 200 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SNTB1Q13884 538 aaKnown RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SEMA6DQ8NFY4 1073 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 CMTM2Q8TAZ6 248 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SPACA5Q96QH8 159 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM272A0A1B0GTI8 110 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 OR6C68A6NDL8 312 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ZNF732B4DXR9 585 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 K7EQM0 130 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 RGS13O14921 159 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 IGHA1P01876 353 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 CT62P0C5K7 136 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 PAX6P26367 422 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 CCR5P51681 352 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 GFERP55789 205 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 LSM11P83369 360 aaKnown RBP eCLIP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 PRSS53Q2L4Q9 553 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM81Q6P7N7 255 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 WDR5BQ86VZ2 330 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 WFDC8Q8IUA0 241 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ETFBKMTQ8IXQ9 262 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM217Q8N7C4 229 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 BHLHE23Q8NDY6 225 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 FAM71CQ8NEG0 241 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ZNF764Q96H86 408 aaPredicted RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 OPA3Q9H6K4 179 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 MED29Q9NX70 200 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 LSM2Q9Y333 95 aaKnown RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TTC3P53804 2025 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ARPC4-TTLL3A0A0A6YYG9 625 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 LRP5LA4QPB2 252 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 NDUFB6O95139 128 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 RPS23P62266 143 aaKnown RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ELFN2Q5R3F8 820 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 VN1R4Q7Z5H5 301 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 OR10J5Q8NHC4 309 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 WDR89Q96FK6 387 aaPredicted RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 CCDC74BQ96LY2 380 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ABHD1Q96SE0 405 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SHARPINQ9H0F6 387 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 FBXO4Q9UKT5 387 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 PLA2G10O15496 165 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TNFSF15O95150 251 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 QDPRP09417 244 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 MGMTP16455 207 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ZP3P21754 424 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 RAB13P51153 203 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SLC25A1P53007 311 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SMAD4Q13485 552 aaKnown RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 LAIR2Q6ISS4 152 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM200AQ86VY9 491 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 PRSS35Q8N3Z0 413 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 KCNRGQ8N5I3 272 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 GJC3Q8NFK1 279 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TSPAN32Q96QS1 320 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 OR2A5Q96R48 311 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 GPA33Q99795 319 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 TMEM231Q9H6L2 316 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 OR5V1Q9UGF6 321 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 ZFC3H1O60293 1989 aaKnown RBP7.53□□□□□ -1.2
ALMS1-208ENST00000620466 RPS10-NUDT3A0A1W2PQS6 291 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 SHISA7A6NL88 538 aa7.53□□□□□ -1.2
ALMS1-208ENST00000620466 DRD3P35462 400 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms