RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PRAMEF7Q5VXH5 474 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 OR8S1Q8NH09 359 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 SUSD6Q92537 303 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 PRRX2Q99811 253 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 LRFN3Q9BTN0 628 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 G6PC3Q9BUM1 346 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 HCAR1Q9BXC0 346 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 KLHL28Q9NXS3 571 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 IL36AQ9UHA7 158 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 PCYT1BQ9Y5K3 369 aaPredicted RBP9.3□□□□□ -0.92
VPS11-207ENST00000620429 COL6A3P12111 3177 aa9.3□□□□□ -0.92
VPS11-207ENST00000620429 TRBV2A0A0J9YWF9 115 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 LINC01553A4QN01 128 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ZNF354AO60765 605 aaPredicted RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 RAMP1O60894 148 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 CST4P01036 141 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 STATHP02808 62 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 AMY2AP04746 511 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 SELEP16581 610 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 CSRP1P21291 193 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 GDI1P31150 447 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 BMI1P35226 326 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 SNRPNP63162 240 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 TGM3Q08188 693 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 PPP1R1AQ13522 171 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 RPL7L1Q6DKI1 246 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 TANGO2Q6ICL3 276 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 KIRREL2Q6UWL6 708 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 WDR88Q6ZMY6 472 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 MTSS1LQ765P7 747 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 PARS2Q7L3T8 475 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 GDF7Q7Z4P5 450 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ARL14Q8N4G2 192 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 PLPP5Q8NEB5 264 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 VN1R2Q8NFZ6 395 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 OR5T1Q8NG75 326 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 CMBLQ96DG6 245 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 PBDC1Q9BVG4 233 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 GPR174Q9BXC1 333 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 Q9N2J8 555 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ZNF107Q9UII5 783 aaPredicted RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 TRBV11-1A0A0K0K1C0 115 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ZNF727A8MUV8 499 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 RAB27BO00194 218 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 PLRG1O43660 514 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 PGA3P0DJD8 388 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 C8orf89P0DMQ9 161 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 FUT1P19526 365 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 LMO1P25800 156 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 RPL29P47914 159 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 DIO1P49895 249 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ACTA2P62736 377 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ACTG2P63267 376 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 FAM3AP98173 230 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 ENPP2Q13822 863 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 NKAIN1Q4KMZ8 207 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 SOHLH1Q5JUK2 328 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 YOD1Q5VVQ6 348 aaPredicted RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 BTNL3Q6UXE8 466 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 MBOAT2Q6ZWT7 520 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 KCTD9Q7L273 389 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 C9orf40Q8IXQ3 194 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 OR9K2Q8NGE7 335 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 MOAP1Q96BY2 351 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 OR7D2Q96RA2 312 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 VAX2Q9UIW0 290 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 PADI1Q9ULC6 663 aa9.29□□□□□ -0.92
VPS11-207ENST00000620429 MRPS23Q9Y3D9 190 aaKnown RBP9.29□□□□□ -0.92
VPS11-207ENST00000620429 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
VPS11-207ENST00000620429 CXorf51AA0A1B0GTR3 108 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 C20orf202A1L168 122 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 C5orf51A6NDU8 294 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 DHRS7CA6NNS2 312 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 PRRT4C9JH25 899 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 CTAG2O75638 210 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 CSTBP04080 98 aaKnown RBP9.28□□□□□ -0.92
VPS11-207ENST00000620429 THY1P04216 161 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 GAPDHP04406 335 aaKnown RBP9.28□□□□□ -0.92
VPS11-207ENST00000620429 CA3P07451 260 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 CISD3P0C7P0 127 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 FOLR1P15328 257 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 SLC2A5P22732 501 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 IL13RA1P78552 427 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 TP53I3Q53FA7 332 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 OR4C11Q6IEV9 310 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 ZNF547Q8IVP9 402 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 RPS4Y2Q8TD47 263 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 SEH1LQ96EE3 360 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 SNX22Q96L94 193 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 C1QTNF2Q9BXJ5 285 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 OR52D1Q9H346 318 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 PELI2Q9HAT8 420 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 VSIG4Q9Y279 399 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 TCF20Q9UGU0 1960 aaKnown RBP9.28□□□□□ -0.92
VPS11-207ENST00000620429 SPINT1O43278 529 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 DUS4LO95620 317 aaKnown RBP9.28□□□□□ -0.92
VPS11-207ENST00000620429 ZGLP1P0C6A0 271 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 BCKDHBP21953 392 aa9.28□□□□□ -0.92
VPS11-207ENST00000620429 EDNRAP25101 427 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms