RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 BAIAP2Q9UQB8 552 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 PCDHGB1Q9Y5G3 927 aa9.96□□□□□ -0.82
UPF3B-204ENST00000619445 TRAV38-1A0A0B4J264 116 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 CD300LBA8K4G0 201 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 H0YL77 283 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 ARPC2O15144 300 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 TMPRSS2O15393 492 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 SNX3O60493 162 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 GPANK1O95872 356 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 APOC1P02654 83 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 HLA-DPB1P04440 258 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 OTX1P32242 354 aaPredicted RBP9.95□□□□□ -0.82
UPF3B-204ENST00000619445 PSMB10P40306 273 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 SLC15A1P46059 708 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 HMGA2P52926 109 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 MAB21L1Q13394 359 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 SNCBQ16143 134 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 OTPQ5XKR4 325 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 C16orf87Q6PH81 154 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 ZDHHC21Q8IVQ6 265 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 TMEM86BQ8N661 226 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 PNLDC1Q8NA58 520 aaKnown RBP9.95□□□□□ -0.82
UPF3B-204ENST00000619445 SDR9C7Q8NEX9 313 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 PRDM13Q9H4Q3 707 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 WDR76Q9H967 626 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 PNRC2Q9NPJ4 139 aaKnown RBP9.95□□□□□ -0.82
UPF3B-204ENST00000619445 C14orf119Q9NWQ9 140 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 IL20Q9NYY1 176 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 V9GYQ6 96 aa9.95□□□□□ -0.82
UPF3B-204ENST00000619445 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 GGT3PA6NGU5 568 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 LGALS8O00214 317 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 P2RY10O00398 339 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 XRCC2O43543 280 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 FAM20BO75063 409 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 DCTN3O75935 186 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF205O95201 554 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 CFL1P23528 166 aaKnown RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 FMO3P31513 532 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 GRK5P34947 590 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 RPL15P61313 204 aaKnown RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 GK3PQ14409 553 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 TAF13Q15543 124 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 SLC9A3R2Q15599 337 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 CLEC12AQ5QGZ9 265 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 PGBD2Q6P3X8 592 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 RASSF6Q6ZTQ3 369 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 BCL6BQ8N143 479 aaPredicted RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 ARHGAP24Q8N264 748 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 FITM2Q8N6M3 262 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 ZDHHC16Q969W1 377 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 FAM71F1Q96KD3 344 aaPredicted RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 CDRT15Q96T59 188 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 COPS4Q9BT78 406 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 ADAT1Q9BUB4 502 aaKnown RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 MUC13Q9H3R2 512 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 TOR3AQ9H497 397 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 MRPL22Q9NWU5 206 aaKnown RBP9.94□□□□□ -0.82
UPF3B-204ENST00000619445 TAGLN3Q9UI15 199 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 MMP24Q9Y5R2 645 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 MEGF8Q7Z7M0 2845 aa9.94□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF878C9JN71 531 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 TNFRSF11BO00300 401 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 BHLHE40O14503 412 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 IFNGP01579 166 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 CRYBA1P05813 215 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 CA6P23280 308 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 PMELP40967 661 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 ENTPD1P49961 510 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 GRB2P62993 217 aaKnown RBP9.93□□□□□ -0.82
UPF3B-204ENST00000619445 PCK2Q16822 640 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 TEX30Q5JUR7 227 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 SLC35F1Q5T1Q4 408 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 RHOUQ7L0Q8 258 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 LNX2Q8N448 690 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 FTMTQ8N4E7 242 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 OR10S1Q8NGN2 331 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 MAP6Q96JE9 813 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 C1orf147Q96MC9 270 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-204ENST00000619445 TECTBQ96PL2 329 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 KCNJ15Q99712 375 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 FAM107BQ9H098 131 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 MMADHCQ9H3L0 296 aaPredicted RBP9.93□□□□□ -0.82
UPF3B-204ENST00000619445 UNKLQ9H9P5 680 aaKnown RBP9.93□□□□□ -0.82
UPF3B-204ENST00000619445 ACTR3BQ9P1U1 418 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 LYVE1Q9Y5Y7 322 aa9.93□□□□□ -0.82
UPF3B-204ENST00000619445 OOEPA6NGQ2 149 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 ANKRD30BLA7E2S9 258 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF879B4DU55 563 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 TIPRLO75663 272 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 CCNB2O95067 398 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 SLC25A1P53007 311 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 FGF12P61328 243 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 MXRA7P84157 204 aa9.92□□□□□ -0.82
UPF3B-204ENST00000619445 ZNF92Q03936 586 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms