RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 GALNT11Q8NCW6 608 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 PLPP5Q8NEB5 264 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 FNDC9Q8TBE3 224 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 PPP1R1CQ8WVI7 109 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 ASB5Q8WWX0 329 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 CMBLQ96DG6 245 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF799Q96GE5 643 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 MLXQ9UH92 298 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 GDF2Q9UK05 429 aaPredicted RBP5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 HDGFL3Q9Y3E1 203 aa5.05□□□□□ -1.6
SYNCRIP-204ENST00000616122 A0A0D9SG52 128 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ANKRD20A5PA0PJZ0 165 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 CXCL13O43927 109 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 RBMXL2O75526 392 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FKBP2P26885 142 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 EPHA8P29322 1005 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 S100GP29377 79 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PER3P56645 1201 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FXYD4P59646 89 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF616Q08AN1 781 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SPIN3Q5JUX0 258 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ELFN2Q5R3F8 820 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 GUSBP11Q6P575 273 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 UNQ9370/PRO34162Q6UXP9 181 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 NLRC3Q7RTR2 1065 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SULF2Q8IWU5 870 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SGPP2Q8IWX5 399 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ARRDC1Q8N5I2 433 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC26A10Q8NG04 563 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR11H7Q8NGC8 314 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR2I1PQ8NGU4 316 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR10R2Q8NGX6 335 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF501Q96CX3 271 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 TIMP4Q99727 224 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF416Q9BWM5 594 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 B4GALT7Q9UBV7 327 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FOXJ3Q9UPW0 622 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 HRH3Q9Y5N1 445 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PHF3Q92576 2039 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 NYNRINQ9P2P1 1898 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 E9PQ18 207 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SULT1C2O00338 296 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SCGB1D2O95969 90 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 F10P00742 488 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OPRM1P35372 400 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 RPS4XP62701 263 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FAM122BQ7Z309 247 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SLC25A45Q8N413 288 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 MARCH1Q8TCQ1 289 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 TMED6Q8WW62 240 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 DCUN1D4Q92564 292 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 RBPMSQ93062 196 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 RASL10BQ96S79 203 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF649Q9BS31 505 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 NUP50Q9UKX7 468 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 A0A1W2PQD3 144 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR2M5A3KFT3 312 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SCO1O75880 301 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 CD1AP06126 327 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 CPN1P15169 458 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ADH6P28332 368 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 GALNSP34059 522 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FOLR3P41439 243 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 CAV2P51636 162 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SNTB1Q13884 538 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 INPP5JQ15735 1006 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 THEM4Q5T1C6 240 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 NHLRC1Q6VVB1 395 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 RNF133Q8WVZ7 376 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FGF11Q92914 225 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 VRK1Q99986 396 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF275Q9NSD4 429 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FBXO9Q9UK97 447 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FADS1O60427 444 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 DBHP09172 617 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PSMB6P28072 239 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 AKR1C2P52895 323 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SNU13P55769 128 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 AKR1C1Q04828 323 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ECH1Q13011 328 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PAN3Q58A45 887 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ATPAF1Q5TC12 328 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR52W1Q6IF63 320 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ZNF565Q8N9K5 539 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 ALKBH3Q96Q83 286 aaPredicted RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 CMSS1Q9BQ75 279 aaKnown RBP5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PBOV1Q9GZY1 135 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 OR10A2Q9H208 303 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 RAB27BO00194 218 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PLPP3O14495 311 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FCGR2AP12318 317 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 GABRA1P14867 456 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 FAHP16930 419 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 MST1P26927 711 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 SELENOPP49908 381 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 Q5BKY6 102 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 PXDC1Q5TGL8 231 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 C9orf135Q5VTT2 229 aa5.04□□□□□ -1.6
SYNCRIP-204ENST00000616122 DOK3Q7L591 496 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms