RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 MCHR2Q969V1 340 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 HIST1H2BAQ96A08 127 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 PHYHIPLQ96FC7 376 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 OR2M4Q96R27 311 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 RNF126Q9BV68 326 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 CNTD2Q9H8S5 307 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 MMP25Q9NPA2 562 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 IL23AQ9NPF7 189 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 PILRAQ9UKJ1 303 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 FBXL21Q9UKT6 434 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 TMEM269A0A1B0GVZ9 245 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 PRSS38A1L453 326 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF729A6NN14 1252 aaPredicted RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 CYR61O00622 381 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 EFSO43281 561 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 MBTPS2O43462 519 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF354AO60765 605 aaPredicted RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 CD74P04233 296 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 CTLA4P16410 223 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 AWAT2Q6E213 333 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF813Q6ZN06 617 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 ZNF595Q8IYB9 648 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 MRPL43Q8N983 215 aaKnown RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 OTOSQ8NHW6 89 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ANKRD9Q96BM1 317 aaPredicted RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 MRPL38Q96DV4 380 aaKnown RBP11.79□□□□□ -0.52
MSH6-214ENST00000616033 KIRREL1Q96J84 757 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 OR10C1Q96KK4 312 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 GPER1Q99527 375 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 TOLLIPQ9H0E2 274 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 SLC2A4RGQ9NR83 387 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 LPAR3Q9UBY5 353 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 LRP12Q9Y561 859 aa11.79□□□□□ -0.52
MSH6-214ENST00000616033 A0A0A6YYH2 397 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 A6NJ64 397 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 PHOX2AO14813 284 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 CYTIPO60759 359 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 SLC25A4P12235 298 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 SLC18B1Q6NT16 456 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 SLC25A42Q86VD7 318 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 CA13Q8N1Q1 262 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 ZNF321PQ8N8H1 164 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 MITD1Q8WV92 249 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 DGAT2Q96PD7 388 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 ALX4Q9H161 411 aaPredicted RBP11.78□□□□□ -0.52
MSH6-214ENST00000616033 FAM60AQ9NP50 221 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 A0A1B0GTQ1 180 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 K7EQS6 105 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 KAT7O95251 611 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 TSPAN15O95858 294 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 CA3P07451 260 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 JMJD7P0C870 316 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 GLRA1P23415 457 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 TFF2Q03403 129 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 RIPPLY1Q0D2K3 151 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 GAMTQ14353 236 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 FAM78AQ5JUQ0 283 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 FAM180AQ6UWF9 173 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 TMEM68Q96MH6 324 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 C1orf198Q9H425 327 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 TMEM14AQ9Y6G1 99 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 ASXL3Q9C0F0 2248 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 CABIN1Q9Y6J0 2220 aa11.78□□□□□ -0.52
MSH6-214ENST00000616033 H0YIG0 161 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 EIF2S3P41091 472 aaKnown RBP11.77□□□□□ -0.52
MSH6-214ENST00000616033 NUBP1P53384 320 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 ACKR1Q16570 336 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 MICBQ29980 383 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 C4orf17Q53FE4 359 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 MRGPRFQ96AM1 343 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 ZNF587Q96SQ5 575 aaPredicted RBP11.77□□□□□ -0.52
MSH6-214ENST00000616033 FOXQ1Q9C009 403 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 GFOD1Q9NXC2 390 aa11.77□□□□□ -0.52
MSH6-214ENST00000616033 C7orf77A4D0Y5 90 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 TGFBR3LH3BV60 316 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 SCDO00767 359 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 AK1P00568 194 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 COX5BP10606 129 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 RNH1P13489 461 aaKnown RBP11.77□□□□□ -0.53
MSH6-214ENST00000616033 OR3A2P47893 321 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 EGR4Q05215 589 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 MST1LQ2TV78 715 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 RNF212Q495C1 297 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 PNLDC1Q8NA58 520 aaKnown RBP11.77□□□□□ -0.53
MSH6-214ENST00000616033 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 SPPL3Q8TCT6 385 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 SLC25A43Q8WUT9 341 aaPredicted RBP11.77□□□□□ -0.53
MSH6-214ENST00000616033 OR8B4Q96RC9 309 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 NUDT22Q9BRQ3 303 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 CCDC163A0A0D9SF12 145 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 ZNF823P16415 610 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 EMP2P54851 167 aa11.77□□□□□ -0.53
MSH6-214ENST00000616033 PYY3Q5JQD4 70 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms