RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SLC25A35Q3KQZ1 300 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 YIF1BQ5BJH7 314 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 BCL2L15Q5TBC7 163 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 DRAM2Q6UX65 266 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 PRSS45Q7RTY3 260 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 LUZP2Q86TE4 346 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 LIX1LQ8IVB5 337 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 FAM169BQ8N8A8 192 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 AKR7LQ8NHP1 331 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 ASB5Q8WWX0 329 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 GHSRQ92847 366 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF75AQ96N20 296 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 DCLRE1CQ96SD1 692 aaKnown RBP9.93□□□□□ -0.82
SLIRP-212ENST00000613856 COMMD4Q9H0A8 199 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 OR52A1Q9UKL2 312 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF281Q9Y2X9 895 aa9.93□□□□□ -0.82
SLIRP-212ENST00000613856 CCDC160A6NGH7 325 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 OR5H1A6NKK0 313 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 KIAA1324LA8MWY0 1029 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 H3BMQ9 156 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 M0R135 149 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 SLC22A1O15245 554 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 GPX5O75715 221 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 RGS9O75916 674 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 SERPINA3P01011 423 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ISG15P05161 165 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ACSM4P0C7M7 580 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 UBCP0CG48 685 aaKnown RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 FGF9P31371 208 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ASCL1P50553 236 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 PRKXP51817 358 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 TPTEP56180 551 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF121P58317 390 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 RPS11P62280 158 aaKnown RBP eCLIP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 FABP5Q01469 135 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 PLP2Q04941 152 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 FBXL19-AS1Q494R0 122 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 TIMM23BQ5SRD1 257 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF704Q6ZNC4 412 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 SSX8Q7RTT4 187 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 MDP1Q86V88 176 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 PRIMA1Q86XR5 153 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF584Q8IVC4 421 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 DMRTC2Q8IXT2 367 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ELMOD2Q8IZ81 293 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF283Q8N7M2 679 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 WDR31Q8NA23 367 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 CPEB3Q8NE35 698 aaKnown RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 STEAP2Q8NFT2 490 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 OR5AK2Q8NH90 309 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 RGP1Q92546 391 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 THRSPQ92748 146 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 RPL3LQ92901 407 aaKnown RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 C12orf43Q96C57 262 aaKnown RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF799Q96GE5 643 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 FOXC2Q99958 501 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 PDCD1LG2Q9BQ51 273 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 TMED9Q9BVK6 235 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 PBOV1Q9GZY1 135 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 OR51E2Q9H255 320 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 SP140LQ9H930 580 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 CRNNQ9UBG3 495 aaPredicted RBP9.92□□□□□ -0.82
SLIRP-212ENST00000613856 SSR3Q9UNL2 185 aa9.92□□□□□ -0.82
SLIRP-212ENST00000613856 TRBV5-5A0A0J9YX44 114 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 IQCMA0A1B0GVH7 501 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 FAM221AA4D161 298 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 GABRPO00591 440 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 GATBO75879 557 aaKnown RBP9.91□□□□□ -0.82
SLIRP-212ENST00000613856 IGKV3-15P01624 115 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TTRP02766 147 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 SERPINA5P05154 406 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 DBHP09172 617 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 CBR1P16152 277 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF14P17017 642 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-212ENST00000613856 ACHEP22303 614 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 CCKARP32238 428 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TUBA1BP68363 451 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TSC22D1Q15714 1073 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 C3orf36Q3SXR2 165 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 PAMR1Q6UXH9 720 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TUBA1AQ71U36 451 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 ZNF676Q8N7Q3 588 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 OR8B12Q8NGG6 310 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 OR52H1Q8NGJ2 320 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 SLC7A6Q92536 515 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 PHYHIPQ92561 330 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TMEM203Q969S6 136 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TRMT61AQ96FX7 289 aaKnown RBP9.91□□□□□ -0.82
SLIRP-212ENST00000613856 POM121L2Q96KW2 1035 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 CHCHD6Q9BRQ6 235 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 TXNL4BQ9NX01 149 aaKnown RBP9.91□□□□□ -0.82
SLIRP-212ENST00000613856 COQ3Q9NZJ6 369 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 GTF2A1LQ9UNN4 478 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 SLC22A13Q9Y226 551 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 PLEKHA6Q9Y2H5 1048 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 SLC25A15Q9Y619 301 aa9.91□□□□□ -0.82
SLIRP-212ENST00000613856 LOC100509620A0A075B734 347 aa9.9□□□□□ -0.82
SLIRP-212ENST00000613856 A0A0U1RQV5 110 aa9.9□□□□□ -0.82
SLIRP-212ENST00000613856 LOC100506127A0A0U1RQW1 187 aa9.9□□□□□ -0.82
SLIRP-212ENST00000613856 LOC107986453A0A1B0GWG9 222 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms